ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11429059	50S ribosomal protein L13
mtr-r.5	11429059	50S ribosomal protein L13
gma-u.5	100806854	50S ribosomal protein L13
gma-u.5	100799712	50S ribosomal protein L13-like
gma-u.5	100499790	uncharacterized LOC100499790
ppo-u.5	7467704	uncharacterized LOC7467704
ppo-u.5	7461305	uncharacterized LOC7461305
ath-u.5	AT3G01790	Ribosomal protein L13 family protein
vvi-u.5	100252470	uncharacterized LOC100252470
sly-u.5	101267936	uncharacterized LOC101267936
osa-u.5	107276303	uncharacterized LOC107276303
osa-u.5	4338198	uncharacterized LOC4338198
osa-u.5	4338199	uncharacterized LOC4338199
zma-u.5	100273323	uncharacterized LOC100273323
zma-u.5	100284119	50S ribosomal protein L13, mitochondrial-like

Annotation

functional annotation

KEGG

mtr03010 [list] [network] Ribosome (1813 genes)

GO BP

GO:0017148 [list] [network] negative regulation of translation	(11 genes)	IEA
GO:0006412 [list] [network] translation	(552 genes)	IEA

GO CC

GO:0005762 [list] [network] mitochondrial large ribosomal subunit	(34 genes)	IEA
GO:0005840 [list] [network] ribosome	(372 genes)	IEA

GO MF

GO:0003729 [list] [network] mRNA binding	(294 genes)	IEA
GO:0003735 [list] [network] structural constituent of ribosome	(369 genes)	IEA

Protein

XP_003601535.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, chlo 2, nucl 1, mito 1

(predict for XP_003601535.2)

Subcellular
localization
TargetP

mito 7, other 3

(predict for XP_003601535.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11429059	mtr-r.5 for 11429059	gma-u.5 for 100806854	gma-u.5 for 100799712	gma-u.5 for 100499790	ppo-u.5 for 7467704	ppo-u.5 for 7461305	ath-u.5 for AT3G01790	vvi-u.5 for 100252470	sly-u.5 for 101267936	osa-u.5 for 107276303	osa-u.5 for 4338198	osa-u.5 for 4338199	zma-u.5 for 100273323	zma-u.5 for 100284119

Ortholog

Ortholog ID: 6560

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

50S ribosomal protein L13

uncharacterized LOC100499790

50S ribosomal protein L13

uncharacterized LOC7467704

uncharacterized LOC7461305

Ribosomal protein L13 family protein

50S ribosomal protein L13

uncharacterized LOC100252470

50S ribosomal protein L13

50S ribosomal protein L13-like

uncharacterized LOC102619271

uncharacterized LOC101267936

50S ribosomal protein L13

uncharacterized LOC107806937

uncharacterized LOC107801585

uncharacterized LOC107276303

uncharacterized LOC4338198

uncharacterized LOC100273323

50S ribosomal protein L13, mitochondrial-like

50S ribosomal protein L13

uncharacterized LOC123129001

50S ribosomal protein L13

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	5
ppo03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	11
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	7
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	7
bra00230	Purine metabolism	2
bra00250	Alanine, aspartate and glutamate metabolism	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi00261	Monobactam biosynthesis	2
ghi00300	Lysine biosynthesis	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	7
ghi00261	Monobactam biosynthesis	2
ghi00300	Lysine biosynthesis	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	7
sly03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	7
nta03040	Spliceosome	5
nta03013	Nucleocytoplasmic transport	4
nta03015	mRNA surveillance pathway	4
nta03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	7
nta03010	Ribosome	5
nta03013	Nucleocytoplasmic transport	5
nta03015	mRNA surveillance pathway	5
nta03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3
tae00740	Riboflavin metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	2
tae00620	Pyruvate metabolism	2
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae00640	Propanoate metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	7
bdi00240	Pyrimidine metabolism	3
bdi01240	Biosynthesis of cofactors	3
bdi00230	Purine metabolism	3
bdi01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	5
cre01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

11429059

100499790

100806854

7467704

7461305

821078

103849859

103858892

100252470

107914081

121229004

125602321

106393681

102619271

101267936

102583353

107806937

107801585

107276303

4338198

100273323

100284119

123139877

123129001

123403178

8078675

100822076

5723202

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11429059 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11429059 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	3	2	1	1	1	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11429059 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11429059 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**