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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107914081   50S ribosomal protein L13 
 ghi-r.1   121229004   50S ribosomal protein L13 
 ath-u.5   AT3G01790   Ribosomal protein L13 family protein 
 bra-r.6   103858892   50S ribosomal protein L13 
 bra-r.6   103849859   50S ribosomal protein L13 
 bna-r.1   106438875   50S ribosomal protein L13 
 bna-r.1   106393681   50S ribosomal protein L13-like 
 bna-r.1   125602321   50S ribosomal protein L13-like 
 cit-r.1   102619271   uncharacterized LOC102619271 
 gma-u.5   100806854   50S ribosomal protein L13 
 gma-u.5   100799712   50S ribosomal protein L13-like 
 gma-u.5   100499790   uncharacterized LOC100499790 
 vvi-u.5   100252470   uncharacterized LOC100252470 
 ppo-u.5   7461305   uncharacterized LOC7461305 
 ppo-u.5   7467704   uncharacterized LOC7467704 
 mtr-u.5   11429059   50S ribosomal protein L13 
 sly-u.5   101267936   uncharacterized LOC101267936 
 sot-r.1   102583353   50S ribosomal protein L13 
 nta-r.1   107801585   uncharacterized LOC107801585 
 nta-r.1   107806937   uncharacterized LOC107806937 
 osa-u.5   4338198   uncharacterized LOC4338198 
 osa-u.5   107276303   uncharacterized LOC107276303 
 osa-u.5   4338199   uncharacterized LOC4338199 
 zma-u.5   100273323   uncharacterized LOC100273323 
 zma-u.5   100284119   50S ribosomal protein L13, mitochondrial-like 
 tae-r.2   123139877   50S ribosomal protein L13 
 tae-r.2   123129001   uncharacterized LOC123129001 
 tae-r.2   123146177   50S ribosomal protein L13 
 hvu-r.1   123403178   50S ribosomal protein L13 
 sbi-r.1   8078675   50S ribosomal protein L13 
 bdi-r.1   100822076   50S ribosomal protein L13 
 cre-r.1   CHLRE_09g405200v5   uncharacterized protein 

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Top 50 coexpressed genes to 107914081 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107914081 (ghi-r.1 coexpression data)

CoexMap"107914081"


ghiLOC107914081 | Entrez gene ID : 107914081    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 3 1 2 1 1 1 2 3 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0017148 [list] [network] negative regulation of translation  (69 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (54 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016698308.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  nucl 3  (predict for XP_016698308.2)
Subcellular
localization
TargetP
chlo 4,  mito 4  (predict for XP_016698308.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107914081
ghi-r.1
for
121229004
ath-u.5
for
AT3G01790
bra-r.6
for
103858892
bra-r.6
for
103849859
bna-r.1
for
106438875
bna-r.1
for
106393681
bna-r.1
for
125602321
cit-r.1
for
102619271
gma-u.5
for
100806854
gma-u.5
for
100799712
gma-u.5
for
100499790
vvi-u.5
for
100252470
ppo-u.5
for
7461305
ppo-u.5
for
7467704
mtr-u.5
for
11429059
sly-u.5
for
101267936
sot-r.1
for
102583353
nta-r.1
for
107801585
nta-r.1
for
107806937
osa-u.5
for
4338198
osa-u.5
for
107276303
osa-u.5
for
4338199
zma-u.5
for
100273323
zma-u.5
for
100284119
tae-r.2
for
123139877
tae-r.2
for
123129001
tae-r.2
for
123146177
hvu-r.1
for
123403178
sbi-r.1
for
8078675
bdi-r.1
for
100822076
cre-r.1
for
CHLRE_09g405200v5


Ortholog ID: 6560
Species ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107914081 LOC121229004 AT3G01790 LOC103858892 LOC103849859 LOC106393681 LOC125602321 LOC106388686 LOC102619271 LOC100806854 LOC100799712 LOC100499790 LOC100252470 LOC7461305 LOC7467704 LOC11429059 LOC101267936 LOC102583353 LOC107801585 LOC107806937 LOC4338198 LOC107276303 LOC4338199 LOC100273323 LOC100284119 LOC123139877 LOC123129001 LOC123146177 LOC123403178 LOC8078675 LOC100822076 CHLRE_09g405200v5
Function* 50S ribosomal protein L13 50S ribosomal protein L13 Ribosomal protein L13 family protein 50S ribosomal protein L13 50S ribosomal protein L13 50S ribosomal protein L13-like 50S ribosomal protein L13-like 50S ribosomal protein L13 uncharacterized LOC102619271 50S ribosomal protein L13 50S ribosomal protein L13-like uncharacterized LOC100499790 uncharacterized LOC100252470 uncharacterized LOC7461305 uncharacterized LOC7467704 50S ribosomal protein L13 uncharacterized LOC101267936 50S ribosomal protein L13 uncharacterized LOC107801585 uncharacterized LOC107806937 uncharacterized LOC4338198 uncharacterized LOC107276303 uncharacterized LOC4338199 uncharacterized LOC100273323 50S ribosomal protein L13, mitochondrial-like 50S ribosomal protein L13 uncharacterized LOC123129001 50S ribosomal protein L13 50S ribosomal protein L13 50S ribosomal protein L13 50S ribosomal protein L13 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi00261 Monobactam biosynthesis 2
ghi00300 Lysine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00261 Monobactam biosynthesis 2
ghi00300 Lysine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra00230 Purine metabolism 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03010 Ribosome 5
nta03013 Nucleocytoplasmic transport 5
nta03015 mRNA surveillance pathway 5
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 2
tae00620 Pyruvate metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae00640 Propanoate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00071 Fatty acid degradation 3
tae00350 Tyrosine metabolism 3
tae00620 Pyruvate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi00240 Pyrimidine metabolism 3
bdi01240 Biosynthesis of cofactors 3
bdi00230 Purine metabolism 3
bdi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 5
cre01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107914081 121229004 821078 103858892 103849859 106393681 125602321 106388686 102619271 100806854 100799712 100499790 100252470 7461305 7467704 11429059 101267936 102583353 107801585 107806937 4338198 107276303 4338199 100273323 100284119 123139877 123129001 123146177 123403178 8078675 100822076 5723202
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