ATTED-II : GeneCoexpression result

Species	Gene	Description
bra-r.6	103869349	U-box domain-containing protein 12
bra-r.6	103859844	U-box domain-containing protein 4
bna-r.1	111214180	U-box domain-containing protein 4-like
bna-r.1	106428822	U-box domain-containing protein 12-like
bna-r.1	106401976	U-box domain-containing protein 4
ath-u.5	AT3G20170	ARM repeat superfamily protein
ghi-r.1	107927277	U-box domain-containing protein 11
ghi-r.1	107886290	outer dynein arm-docking complex subunit 2
cit-r.1	102619493	vacuolar protein 8
gma-u.5	100819735	vacuolar protein 8
vvi-u.5	100248730	U-box domain-containing protein 14
mtr-u.5	25489066	uncharacterized LOC25489066
sly-u.5	101268164	uncharacterized LOC101268164
sot-r.1	102594423	armadillo repeat-containing protein 4
nta-r.1	107783048	uncharacterized LOC107783048
nta-r.1	107784381	uncharacterized LOC107784381

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(6277 genes)

IEA

Protein

XP_018514713.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 2, plas 2, E.R. 2, E.R._plas 2, nucl 1, vacu 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_018514713.1)

Subcellular
localization
TargetP

other 5, chlo 5

(predict for XP_018514713.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103869349	bra-r.6 for 103859844	bna-r.1 for 111214180	bna-r.1 for 106428822	bna-r.1 for 106401976	ath-u.5 for AT3G20170	ghi-r.1 for 107927277	ghi-r.1 for 107886290	cit-r.1 for 102619493	gma-u.5 for 100819735	vvi-u.5 for 100248730	mtr-u.5 for 25489066	sly-u.5 for 101268164	sot-r.1 for 102594423	nta-r.1 for 107783048	nta-r.1 for 107784381

Ortholog

Ortholog ID: 12431

Species

bra

bna

ath

ghi

cit

gma

vvi

mtr

sly

sot

nta

Symbol

Function^*

U-box domain-containing protein 12

U-box domain-containing protein 4

U-box domain-containing protein 4-like

U-box domain-containing protein 12-like

outer dynein arm-docking complex subunit 2-like

ARM repeat superfamily protein

U-box domain-containing protein 11

outer dynein arm-docking complex subunit 2

vacuolar protein 8

U-box domain-containing protein 14

uncharacterized LOC25489066

uncharacterized LOC101268164

armadillo repeat-containing protein 4

uncharacterized LOC107783048

uncharacterized LOC107784381

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra04136	Autophagy - other	2
bra04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	3
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	5
mtr00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

103869349

103859844

111214180

106428822

106389322

821561

107927277

107886290

102619493

100819735

100248730

25489066

101268164

102594423

107783048

107784381

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103869349 (bra-r.6 coexpression data)

Top 50 enrichment test to 103869349 (bra-r.6 coexpression data)


Species	bra	bna	ath	ghi	cit	gma	vvi	mtr	sly	sot	nta	osa	bdi	ppo	tae	zma	sbi	hvu	cre
Paralog	2	3	1	2	1	1	1	1	1	1	2	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103869349 (bra-r.6 coexpression data)

Top 50 enrichment test to 103869349 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**