ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107886290	outer dynein arm-docking complex subunit 2
ath-u.5	AT3G20170	ARM repeat superfamily protein
gma-u.5	100819735	vacuolar protein 8
vvi-u.5	100248730	U-box domain-containing protein 14
mtr-u.5	25489066	uncharacterized LOC25489066
sly-u.5	101268164	uncharacterized LOC101268164

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(10797 genes)

IEA

Protein

XP_016665681.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 2, plas 1, vacu 1

(predict for XP_016665681.2)

Subcellular
localization
TargetP

other 8

(predict for XP_016665681.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107886290	ath-u.5 for AT3G20170	gma-u.5 for 100819735	vvi-u.5 for 100248730	mtr-u.5 for 25489066	sly-u.5 for 101268164

Ortholog ID: 12431

Species

ghi

ath

bra

bna

cit

gma

vvi

mtr

sly

sot

nta

Symbol

Function^*

outer dynein arm-docking complex subunit 2

U-box domain-containing protein 11

ARM repeat superfamily protein

U-box domain-containing protein 4

U-box domain-containing protein 12

outer dynein arm-docking complex subunit 2-like

U-box domain-containing protein 4-like

vacuolar protein 8

U-box domain-containing protein 14

uncharacterized LOC25489066

uncharacterized LOC101268164

armadillo repeat-containing protein 4

uncharacterized LOC107783048

uncharacterized LOC107784381

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	3
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra04136	Autophagy - other	2
bra04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	5
mtr00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

107886290

107927277

821561

103859844

103869349

106389322

111214180

102619493

100819735

100248730

25489066

101268164

102594423

107783048

107784381

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107886290 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886290 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	mtr	sly	hvu	zma	bna	cit	bra	osa	ppo	sbi	bdi	nta	tae	cre	sot
Paralog	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107886290 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886290 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**