Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103872449   serine/arginine-rich splicing factor SR45 
 ath-u.5   SR45   arginine/serine-rich 45 
 gma-u.5   100783566   serine/arginine-rich splicing factor SR45 
 gma-u.5   100804778   serine/arginine-rich splicing factor SR45 
 vvi-u.5   100267894   serine/arginine-rich splicing factor SR45 
 ppo-u.5   18103443   serine/arginine-rich splicing factor SR45 
 mtr-u.5   11406805   serine/arginine-rich splicing factor SR45 
 sly-u.5   101257116   serine/arginine-rich splicing factor SR45 
 osa-u.5   4337561   serine/arginine-rich splicing factor SR45 
 osa-u.5   4325394   serine/arginine-rich splicing factor SR45 
 zma-u.5   103636269   uncharacterized LOC103636269 
 zma-u.5   103650711   uncharacterized LOC103650711 

close


Top 50 coexpressed genes to 103872449 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 103872449 (bra-r.6 coexpression data)

CoexMap"103872449"


braLOC103872449 | Entrez gene ID : 103872449    
Species bra ath gma vvi ppo mtr sly osa zma hvu bna cit ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03013 [list] [network] Nucleocytoplasmic transport (160 genes)
brp03015 [list] [network] mRNA surveillance pathway (205 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (258 genes)  IEA  
GO CC
GO:0061574 [list] [network] ASAP complex  (4 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (316 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
Protein XP_009149094.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 4,  chlo 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_009149094.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_009149094.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103872449
ath-u.5
for
SR45
gma-u.5
for
100783566
gma-u.5
for
100804778
vvi-u.5
for
100267894
ppo-u.5
for
18103443
mtr-u.5
for
11406805
sly-u.5
for
101257116
osa-u.5
for
4337561
osa-u.5
for
4325394
zma-u.5
for
103636269
zma-u.5
for
103650711


Ortholog ID: 4461
Species bra bra bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma zma tae tae hvu hvu sbi bdi bdi cre
Symbol LOC103842841 LOC103835996 LOC106346758 LOC106387586 SR45 LOC107932687 LOC121213755 LOC102613079 LOC100804778 LOC100783566 LOC100267894 LOC18103443 LOC11406805 LOC101257116 LOC102577454 LOC107765050 LOC107827654 LOC4325394 LOC4337561 LOC103636269 LOC103650711 LOC123179857 LOC123080804 LOC123445573 LOC123426013 LOC8077388 LOC112269372 LOC100830616 CHLRE_03g164950v5
Function* serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45-like serine/arginine-rich splicing factor SR45-like arginine/serine-rich 45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45-like serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 putative arginine/serine-rich protein uncharacterized LOC107765050 uncharacterized LOC107827654 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 uncharacterized LOC103636269 uncharacterized LOC103650711 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45-like serine/arginine-rich splicing factor SR45 uncharacterized LOC112269372 serine/arginine-rich splicing factor SR45 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03010 Ribosome 3
mtr03015 mRNA surveillance pathway 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03015 mRNA surveillance pathway 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03008 Ribosome biogenesis in eukaryotes 4
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03040 Spliceosome 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103842841 103835996 106346758 106387586 838230 107932687 121213755 102613079 100804778 100783566 100267894 18103443 11406805 101257116 102577454 107765050 107827654 4325394 4337561 103636269 103650711 123179857 123080804 123445573 123426013 8077388 112269372 100830616 5729043
The preparation time of this page was 0.1 [sec].