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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8077388   serine/arginine-rich splicing factor SR45 
 zma-u.5   103636269   uncharacterized LOC103636269 
 zma-u.5   103650711   uncharacterized LOC103650711 
 osa-u.5   4337561   serine/arginine-rich splicing factor SR45 
 osa-u.5   4325394   serine/arginine-rich splicing factor SR45 
 ath-u.5   SR45   arginine/serine-rich 45 
 gma-u.5   100804778   serine/arginine-rich splicing factor SR45 
 gma-u.5   100783566   serine/arginine-rich splicing factor SR45 
 sly-u.5   101257116   serine/arginine-rich splicing factor SR45 
 vvi-u.5   100267894   serine/arginine-rich splicing factor SR45 
 ppo-u.5   18103443   serine/arginine-rich splicing factor SR45 
 mtr-u.5   11406805   serine/arginine-rich splicing factor SR45 

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Top 50 coexpressed genes to 8077388 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8077388 (sbi-r.1 coexpression data)

CoexMap"8077388"


sbiLOC8077388 | Entrez gene ID : 8077388    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03013 [list] [network] Nucleocytoplasmic transport (112 genes)
sbi03015 [list] [network] mRNA surveillance pathway (120 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (170 genes)  IEA  
GO CC
GO:0061574 [list] [network] ASAP complex  (1 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (211 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002456966.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 4  (predict for XP_002456966.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for XP_002456966.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8077388

.
zma-u.5
for
103636269

.
zma-u.5
for
103650711

.
osa-u.5
for
4337561

.
osa-u.5
for
4325394

.
ath-u.5
for
SR45

.
gma-u.5
for
100804778

.
gma-u.5
for
100783566

.
sly-u.5
for
101257116

.
vvi-u.5
for
100267894

.
ppo-u.5
for
18103443

.
mtr-u.5
for
11406805

.


Ortholog ID: 4461
Species ath gma gma sly osa osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol SR45 LOC100804778 LOC100783566 LOC101257116 LOC4325394 LOC4337561 LOC103636269 LOC103650711 LOC103842841 LOC103835996 LOC100267894 LOC18103443 LOC11406805 LOC123179857 LOC123080804 LOC123445573 LOC123426013 LOC107932687 LOC121213755 LOC106346758 LOC106387586 CHLRE_03g164950v5 LOC8077388 LOC102577454 LOC102613079 LOC112269372 LOC100830616 LOC107765050 LOC107827654
Function* arginine/serine-rich 45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 uncharacterized LOC103636269 uncharacterized LOC103650711 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45-like serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45-like serine/arginine-rich splicing factor SR45-like uncharacterized protein serine/arginine-rich splicing factor SR45 putative arginine/serine-rich protein serine/arginine-rich splicing factor SR45-like uncharacterized LOC112269372 serine/arginine-rich splicing factor SR45 uncharacterized LOC107765050 uncharacterized LOC107827654
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03010 Ribosome 3
mtr03015 mRNA surveillance pathway 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03040 Spliceosome 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03015 mRNA surveillance pathway 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03008 Ribosome biogenesis in eukaryotes 4
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838230 100804778 100783566 101257116 4325394 4337561 103636269 103650711 103842841 103835996 100267894 18103443 11406805 123179857 123080804 123445573 123426013 107932687 121213755 106346758 106387586 5729043 8077388 102577454 102613079 112269372 100830616 107765050 107827654
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