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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102613079   serine/arginine-rich splicing factor SR45-like 
 ath-u.5   SR45   arginine/serine-rich 45 
 bra-r.6   103872449   serine/arginine-rich splicing factor SR45 
 bra-r.6   103842841   serine/arginine-rich splicing factor SR45 
 bra-r.6   103835996   serine/arginine-rich splicing factor SR45 
 ghi-r.1   121213755   serine/arginine-rich splicing factor SR45 
 ghi-r.1   107911053   serine/arginine-rich splicing factor SR45 
 bna-r.1   106365596   serine/arginine-rich splicing factor SR45 
 bna-r.1   106346758   serine/arginine-rich splicing factor SR45-like 
 bna-r.1   106387586   serine/arginine-rich splicing factor SR45-like 
 gma-u.5   100804778   serine/arginine-rich splicing factor SR45 
 gma-u.5   100783566   serine/arginine-rich splicing factor SR45 
 vvi-u.5   100267894   serine/arginine-rich splicing factor SR45 
 ppo-u.5   18103443   serine/arginine-rich splicing factor SR45 
 mtr-u.5   11406805   serine/arginine-rich splicing factor SR45 
 sly-u.5   101257116   serine/arginine-rich splicing factor SR45 
 sot-r.1   102577454   putative arginine/serine-rich protein 
 nta-r.1   107765050   uncharacterized LOC107765050 
 nta-r.1   107827654   uncharacterized LOC107827654 
 osa-u.5   4325394   serine/arginine-rich splicing factor SR45 
 osa-u.5   4337561   serine/arginine-rich splicing factor SR45 
 zma-u.5   103650711   uncharacterized LOC103650711 
 zma-u.5   103636269   uncharacterized LOC103636269 
 tae-r.2   123063510   serine/arginine-rich splicing factor SR45 
 tae-r.2   123072613   serine/arginine-rich splicing factor SR45 
 tae-r.2   123103420   serine/arginine-rich splicing factor SR45 
 hvu-r.1   123426013   serine/arginine-rich splicing factor SR45-like 
 hvu-r.1   123445573   serine/arginine-rich splicing factor SR45 
 sbi-r.1   8077388   serine/arginine-rich splicing factor SR45 
 bdi-r.1   100830616   serine/arginine-rich splicing factor SR45 
 bdi-r.1   100845778   serine/arginine-rich splicing factor SR45 
 bdi-r.1   112269372   uncharacterized LOC112269372 
 cre-r.1   CHLRE_03g164950v5   uncharacterized protein 

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Top 50 coexpressed genes to 102613079 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102613079 (cit-r.1 coexpression data)

CoexMap"102613079"


citLOC102613079 | Entrez gene ID : 102613079    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 3 2 3 2 1 1 1 1 1 2 2 2 3 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03013 [list] [network] Nucleocytoplasmic transport (96 genes)
cit03015 [list] [network] mRNA surveillance pathway (106 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (155 genes)  IEA  
GO CC
GO:0061574 [list] [network] ASAP complex  (1 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (168 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_006478039.2 [sequence] [blastp]
XP_006478040.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1  (predict for XP_006478039.2)
nucl 8,  mito 1  (predict for XP_006478040.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006478039.2)
chlo 9  (predict for XP_006478040.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102613079
ath-u.5
for
SR45
bra-r.6
for
103872449
bra-r.6
for
103842841
bra-r.6
for
103835996
ghi-r.1
for
121213755
ghi-r.1
for
107911053
bna-r.1
for
106365596
bna-r.1
for
106346758
bna-r.1
for
106387586
gma-u.5
for
100804778
gma-u.5
for
100783566
vvi-u.5
for
100267894
ppo-u.5
for
18103443
mtr-u.5
for
11406805
sly-u.5
for
101257116
sot-r.1
for
102577454
nta-r.1
for
107765050
nta-r.1
for
107827654
osa-u.5
for
4325394
osa-u.5
for
4337561
zma-u.5
for
103650711
zma-u.5
for
103636269
tae-r.2
for
123063510
tae-r.2
for
123072613
tae-r.2
for
123103420
hvu-r.1
for
123426013
hvu-r.1
for
123445573
sbi-r.1
for
8077388
bdi-r.1
for
100830616
bdi-r.1
for
100845778
bdi-r.1
for
112269372
cre-r.1
for
CHLRE_03g164950v5


Ortholog ID: 4461
Species cit ath bra bra bra ghi ghi ghi bna bna bna gma gma vvi ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi bdi bdi bdi cre
Symbol LOC102613079 SR45 LOC103872449 LOC103842841 LOC103835996 LOC121213755 LOC107911053 LOC107932687 LOC106346758 LOC106387586 LOC106411913 LOC100804778 LOC100783566 LOC100267894 LOC18103443 LOC11406805 LOC101257116 LOC102577454 LOC107765050 LOC107827654 LOC4325394 LOC4337561 LOC103650711 LOC103636269 LOC123072613 LOC123179857 LOC123080804 LOC123426013 LOC123445573 LOC8077388 LOC100830616 LOC100845778 LOC112269372 CHLRE_03g164950v5
Function* serine/arginine-rich splicing factor SR45-like arginine/serine-rich 45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45-like serine/arginine-rich splicing factor SR45-like serine/arginine-rich splicing factor SR45-like serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 putative arginine/serine-rich protein uncharacterized LOC107765050 uncharacterized LOC107827654 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 uncharacterized LOC103650711 uncharacterized LOC103636269 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45-like serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 serine/arginine-rich splicing factor SR45 uncharacterized LOC112269372 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03010 Ribosome 3
mtr03015 mRNA surveillance pathway 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03015 mRNA surveillance pathway 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03008 Ribosome biogenesis in eukaryotes 4
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03010 Ribosome 5
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03013 Nucleocytoplasmic transport 5
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03040 Spliceosome 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102613079 838230 103872449 103842841 103835996 121213755 107911053 107932687 106346758 106387586 106411913 100804778 100783566 100267894 18103443 11406805 101257116 102577454 107765050 107827654 4325394 4337561 103650711 103636269 123072613 123179857 123080804 123426013 123445573 8077388 100830616 100845778 112269372 5729043
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