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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5  AT5G27110  Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1  107938359  pentatricopeptide repeat-containing protein At5g27110 
 cit-r.1  102612538  pentatricopeptide repeat-containing protein At5g27110 
 gma-u.5  100819187  pentatricopeptide repeat-containing protein At5g27110 
 gma-u.5  100817231  pentatricopeptide repeat-containing protein At5g27110 
 vvi-u.5  100246628  pentatricopeptide repeat-containing protein At5g27110 
 vvi-u.5  104878995  pentatricopeptide repeat-containing protein At3g09040, mitochondrial 
 mtr-u.5  11436008  pentatricopeptide repeat-containing protein At5g27110 
 sly-u.5  101257516  pentatricopeptide repeat-containing protein At5g27110 
 sot-r.1  102600898  pentatricopeptide repeat-containing protein At5g27110 
 nta-r.1  142178834  pentatricopeptide repeat-containing protein At5g27110-like 
 osa-u.5  4325920  pentatricopeptide repeat-containing protein At3g22690 
 bdi-r.1  100837674  pentatricopeptide repeat-containing protein At3g22690 

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Top 50 coexpressed genes to AT5G27110 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G27110 (ath-u.5 coexpression data)

CoexMap"103874557"


braLOC103874557 | Entrez gene ID : 103874557
Species ath ghi cit gma vvi mtr sly sot nta osa bdi tae bna ppo zma cre sbi bra hvu
Paralog 1 1 1 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (422 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_033129630.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 1,  cyto 1  (predict for XP_033129630.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_033129630.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ath-u.5
for
AT5G27110


ghi-r.1
for
107938359


cit-r.1
for
102612538


gma-u.5
for
100819187


gma-u.5
for
100817231


vvi-u.5
for
100246628


vvi-u.5
for
104878995


mtr-u.5
for
11436008


sly-u.5
for
101257516


sot-r.1
for
102600898


nta-r.1
for
142178834


osa-u.5
for
4325920


bdi-r.1
for
100837674



Ortholog ID: 12677
Species ath ghi cit gma gma vvi vvi mtr sly sot nta osa bdi
Symbol AT5G27110 LOC107938359 LOC102612538 LOC100819187 LOC100817231 LOC100246628 LOC104878995 LOC11436008 LOC101257516 LOC102600898 LOC142178834 LOC4325920 LOC100837674
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At3g09040, mitochondrial pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110-like pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832769 107938359 102612538 100819187 100817231 100246628 104878995 11436008 101257516 102600898 142178834 4325920 100837674
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