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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   104584282   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 tae-r.2   123144729   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 tae-r.2   123137388   pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like 
 tae-r.2   123127625   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 hvu-r.1   123401433   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 osa-u.5   4329895   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 zma-u.5   103627382   pentatricopeptide repeat-containing protein, mitochondrial-like 
 sbi-r.1   8070616   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 ath-u.5   AT3G04130   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100819027   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 bra-r.6   103848937   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 vvi-u.5   100264769   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 ppo-u.5   7460037   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 mtr-u.5   25497864   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 mtr-u.5   11424420   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 ghi-r.1   107886515   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 ghi-r.1   107909815   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 sot-r.1   102589169   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 cit-r.1   102616033   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 nta-r.1   107828121   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 nta-r.1   107817425   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 

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Top 50 coexpressed genes to 104584282 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 104584282 (bdi-r.1 coexpression data)

CoexMap"104584282"


bdiLOC104584282 | Entrez gene ID : 104584282    
Species bdi tae hvu osa zma sbi ath gma bra vvi ppo mtr ghi sot cit nta bna cre sly
Paralog 1 3 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_024317738.1 [sequence] [blastp]
XP_024317739.1 [sequence] [blastp]
XP_024317740.1 [sequence] [blastp]
XP_024317741.1 [sequence] [blastp]
XP_024317742.1 [sequence] [blastp]
XP_024317743.1 [sequence] [blastp]
XP_024317744.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  cyto_mito 3,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024317738.1)
mito 5,  cyto_mito 3,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024317739.1)
mito 5,  cyto_mito 3,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024317740.1)
mito 5,  cyto_mito 3,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024317741.1)
mito 5,  cyto_mito 3,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024317742.1)
mito 5,  cyto_mito 3,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024317743.1)
mito 5,  cyto_mito 3,  chlo 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_024317744.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_024317738.1)
mito 5  (predict for XP_024317739.1)
mito 5  (predict for XP_024317740.1)
mito 5  (predict for XP_024317741.1)
mito 5  (predict for XP_024317742.1)
mito 5  (predict for XP_024317743.1)
mito 5  (predict for XP_024317744.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
104584282
tae-r.2
for
123144729
tae-r.2
for
123137388
tae-r.2
for
123127625
hvu-r.1
for
123401433
osa-u.5
for
4329895
zma-u.5
for
103627382
sbi-r.1
for
8070616
ath-u.5
for
AT3G04130
gma-u.5
for
100819027
bra-r.6
for
103848937
vvi-u.5
for
100264769
ppo-u.5
for
7460037
mtr-u.5
for
25497864
mtr-u.5
for
11424420
ghi-r.1
for
107886515
ghi-r.1
for
107909815
sot-r.1
for
102589169
cit-r.1
for
102616033
nta-r.1
for
107828121
nta-r.1
for
107817425


Ortholog ID: 11281
Species bdi tae tae tae hvu osa zma sbi ath gma bra vvi ppo mtr mtr ghi ghi sot cit nta nta
Symbol LOC104584282 LOC123144729 LOC123137388 LOC123127625 LOC123401433 LOC4329895 LOC103627382 LOC8070616 AT3G04130 LOC100819027 LOC103848937 LOC100264769 LOC7460037 LOC25497864 LOC11424420 LOC107886515 LOC107909815 LOC102589169 LOC102616033 LOC107828121 LOC107817425
Function* pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At3g04130, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00770 Pantothenate and CoA biosynthesis 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta04626 Plant-pathogen interaction 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
nta03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104584282 123144729 123137388 123127625 123401433 4329895 103627382 8070616 819568 100819027 103848937 100264769 7460037 25497864 11424420 107886515 107909815 102589169 102616033 107828121 107817425
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