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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7460037   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 ppo-r.4   7460037   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 ppo-m.4   7460037   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 gma-u.5   100819027   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 mtr-u.5   25497864   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 mtr-u.5   11424420   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 ath-u.5   AT3G04130   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100264769   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 osa-u.5   4329895   pentatricopeptide repeat-containing protein At3g04130, mitochondrial 
 zma-u.5   103627382   pentatricopeptide repeat-containing protein, mitochondrial-like 

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Top 50 coexpressed genes to 7460037 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7460037 (ppo-u.5 coexpression data)

CoexMap"7460037"


ppoLOC7460037 | Entrez gene ID : 7460037    
Species ppo gma mtr ath vvi osa zma sly sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002315631.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  cyto_mito 3  (predict for XP_002315631.2)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_002315631.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7460037

.
ppo-r.4
for
7460037

.
ppo-m.4
for
7460037

.
gma-u.5
for
100819027

.
mtr-u.5
for
25497864

.
mtr-u.5
for
11424420

.
ath-u.5
for
AT3G04130

.
vvi-u.5
for
100264769

.
osa-u.5
for
4329895

.
zma-u.5
for
103627382

.


Ortholog ID: 11281
Species ath gma osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol AT3G04130 LOC100819027 LOC4329895 LOC103627382 LOC103848937 LOC100264769 LOC7460037 LOC25497864 LOC11424420 LOC123144729 LOC123127625 LOC123401433 LOC107886515 LOC107909815 LOC8070616 LOC102589169 LOC102616033 LOC104584282 LOC107828121 LOC107817425
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial pentatricopeptide repeat-containing protein At3g04130, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00770 Pantothenate and CoA biosynthesis 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta04626 Plant-pathogen interaction 3
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
nta03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819568 100819027 4329895 103627382 103848937 100264769 7460037 25497864 11424420 123144729 123127625 123401433 107886515 107909815 8070616 102589169 102616033 104584282 107828121 107817425
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