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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106346009   small RNA degrading nuclease 2-like 
 bna-r.1   106418773   small RNA degrading nuclease 1-like 
 bra-r.6   103829525   small RNA degrading nuclease 3 
 bra-r.6   103840928   small RNA degrading nuclease 1 
 ath-u.5   SDN1   small RNA degrading nuclease 1 
 ath-u.5   SDN2   small RNA degrading nuclease 2 
 ghi-r.1   107913580   small RNA degrading nuclease 1 
 ghi-r.1   107891333   small RNA degrading nuclease 3 
 cit-r.1   102628898   small RNA degrading nuclease 3 
 gma-u.5   100785565   small RNA degrading nuclease 3 
 vvi-u.5   100254172   small RNA degrading nuclease 1 
 ppo-u.5   7483093   small RNA degrading nuclease 1 
 mtr-u.5   25485770   small RNA degrading nuclease 1 
 sly-u.5   101248438   small RNA degrading nuclease 1-like 
 sot-r.1   102581137   small RNA degrading nuclease 1-like 
 nta-r.1   107789218   small RNA degrading nuclease 1-like 
 nta-r.1   107789081   small RNA degrading nuclease 1 
 nta-r.1   107816016   small RNA degrading nuclease 1-like 
 osa-u.5   4337228   small RNA degrading nuclease 1 
 zma-u.5   103645842   small RNA degrading nuclease 1 
 tae-r.2   123050356   small RNA degrading nuclease 3 
 tae-r.2   123047099   small RNA degrading nuclease 1 
 hvu-r.1   123428130   small RNA degrading nuclease 1-like 
 sbi-r.1   8068490   small RNA degrading nuclease 1 
 bdi-r.1   100838655   small RNA degrading nuclease 1 
 cre-r.1   CHLRE_01g036600v5   uncharacterized protein 
 cre-r.1   CHLRE_07g340750v5   uncharacterized protein 

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Top 50 coexpressed genes to 106346009 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106346009 (bna-r.1 coexpression data)

CoexMap"106346009"


bnaLOC106346009 | Entrez gene ID : 106346009    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 2 2 1 1 1 1 1 1 1 3 1 1 2 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03008 [list] [network] Ribosome biogenesis in eukaryotes (6477 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0004527 [list] [network] exonuclease activity  (217 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (12766 genes)  IEA  
Protein XP_013640703.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  cysk 1,  golg 1,  cysk_nucl 1  (predict for XP_013640703.2)
Subcellular
localization
TargetP
scret 4,  other 3  (predict for XP_013640703.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106346009
bna-r.1
for
106418773
bra-r.6
for
103829525
bra-r.6
for
103840928
ath-u.5
for
SDN1
ath-u.5
for
SDN2
ghi-r.1
for
107913580
ghi-r.1
for
107891333
cit-r.1
for
102628898
gma-u.5
for
100785565
vvi-u.5
for
100254172
ppo-u.5
for
7483093
mtr-u.5
for
25485770
sly-u.5
for
101248438
sot-r.1
for
102581137
nta-r.1
for
107789218
nta-r.1
for
107789081
nta-r.1
for
107816016
osa-u.5
for
4337228
zma-u.5
for
103645842
tae-r.2
for
123050356
tae-r.2
for
123047099
hvu-r.1
for
123428130
sbi-r.1
for
8068490
bdi-r.1
for
100838655
cre-r.1
for
CHLRE_01g036600v5
cre-r.1
for
CHLRE_07g340750v5


Ortholog ID: 4405
Species bna bna bna bra bra bra ath ath ghi ghi cit gma vvi ppo mtr sly sot nta nta nta osa zma tae tae hvu sbi bdi cre cre
Symbol LOC106346009 LOC106390333 LOC106366788 LOC103829525 LOC103840928 LOC103829878 SDN1 SDN2 LOC107913580 LOC107891333 LOC102628898 LOC100785565 LOC100254172 LOC7483093 LOC25485770 LOC101248438 LOC102581137 LOC107789081 LOC107816016 LOC107798545 LOC4337228 LOC103645842 LOC123050356 LOC123047099 LOC123428130 LOC8068490 LOC100838655 CHLRE_01g036600v5 CHLRE_07g340750v5
Function* small RNA degrading nuclease 2-like small RNA degrading nuclease 3 small RNA degrading nuclease 3-like small RNA degrading nuclease 3 small RNA degrading nuclease 1 small RNA degrading nuclease 3-like small RNA degrading nuclease 1 small RNA degrading nuclease 2 small RNA degrading nuclease 1 small RNA degrading nuclease 3 small RNA degrading nuclease 3 small RNA degrading nuclease 3 small RNA degrading nuclease 1 small RNA degrading nuclease 1 small RNA degrading nuclease 1 small RNA degrading nuclease 1-like small RNA degrading nuclease 1-like small RNA degrading nuclease 1 small RNA degrading nuclease 1-like small RNA degrading nuclease 1 small RNA degrading nuclease 1 small RNA degrading nuclease 1 small RNA degrading nuclease 3 small RNA degrading nuclease 1 small RNA degrading nuclease 1-like small RNA degrading nuclease 1 small RNA degrading nuclease 1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 5
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03050 Proteasome 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 10
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106346009 106390333 106366788 103829525 103840928 103829878 824172 830437 107913580 107891333 102628898 100785565 100254172 7483093 25485770 101248438 102581137 107789081 107816016 107798545 4337228 103645842 123050356 123047099 123428130 8068490 100838655 66052100 5718102
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