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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106346932   protein SHI RELATED SEQUENCE 7 
 ath-u.5   SRS5   SHI-related sequence 5 
 gma-u.5   100781981   protein EXPRESSION OF TERPENOIDS 1 
 gma-u.5   100789129   protein EXPRESSION OF TERPENOIDS 1 
 vvi-u.5   100260953   protein EXPRESSION OF TERPENOIDS 1 
 vvi-u.5   100250664   protein SHI RELATED SEQUENCE 1 
 mtr-u.5   25501609   protein SHI RELATED SEQUENCE 1 
 mtr-u.5   11439633   protein SHI RELATED SEQUENCE 3 
 sly-u.5   101251254   expression of terpenoids 1 
 sly-u.5   101250986   protein EXPRESSION OF TERPENOIDS 1-like 
 osa-u.5   4347669   protein SHORT INTERNODES 1-like 
 osa-u.5   9269394   protein SHORT INTERNODES 1-like 
 osa-u.5   4342046   protein SHORT INTERNODES 1-like 
 zma-u.5   103629573   protein SHI RELATED SEQUENCE 1 
 zma-u.5   100284538   SHI 
 zma-u.5   103626446   protein SHI RELATED SEQUENCE 1 

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Top 50 coexpressed genes to 106346932 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106346932 (bna-r.1 coexpression data)

CoexMap"106346932"


bnaLOC106346932 | Entrez gene ID : 106346932    
Species bna ath gma vvi mtr sly osa zma bdi hvu bra cit ppo sbi ghi sot nta cre tae
Paralog 1 1 2 2 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (935 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013641857.1 [sequence] [blastp]
XP_013641858.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013641857.1)
nucl 10  (predict for XP_013641858.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013641857.1)
other 9  (predict for XP_013641858.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106346932
ath-u.5
for
SRS5
gma-u.5
for
100781981
gma-u.5
for
100789129
vvi-u.5
for
100260953
vvi-u.5
for
100250664
mtr-u.5
for
25501609
mtr-u.5
for
11439633
sly-u.5
for
101251254
sly-u.5
for
101250986
osa-u.5
for
4347669
osa-u.5
for
9269394
osa-u.5
for
4342046
zma-u.5
for
103629573
zma-u.5
for
100284538
zma-u.5
for
103626446


Ortholog ID: 445
Species bna bra ath ghi ghi cit cit vvi mtr sly sot nta nta osa osa zma zma tae sbi sbi bdi bdi
Symbol LOC106356513 LOC103841026 STY2 LOC107896870 LOC107936562 LOC102626346 LOC102608794 LOC100250664 LOC11439633 LOC101246779 LOC102581821 LOC107799063 LOC107807266 LOC4347669 LOC4342046 LOC103629573 LOC100191342 LOC123152431 LOC8065614 LOC110432445 LOC100836378 LOC100837710
Function* protein SHORT INTERNODES protein SHI RELATED SEQUENCE 1 Lateral root primordium (LRP) protein-like protein protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 5 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 3 protein EXPRESSION OF TERPENOIDS 1-like protein SHI RELATED SEQUENCE 1-like protein EXPRESSION OF TERPENOIDS 1-like protein EXPRESSION OF TERPENOIDS 1-like protein SHORT INTERNODES 1-like protein SHORT INTERNODES 1-like protein SHI RELATED SEQUENCE 1 uncharacterized LOC100191342 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 1-like protein SHI RELATED SEQUENCE 1 protein SHI RELATED SEQUENCE 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
bra03030 DNA replication 2
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00460 Cyanoamino acid metabolism 3
sot00500 Starch and sucrose metabolism 3
sot00999 Biosynthesis of various plant secondary metabolites 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106356513 103841026 829783 107896870 107936562 102626346 102608794 100250664 11439633 101246779 102581821 107799063 107807266 4347669 4342046 103629573 100191342 123152431 8065614 110432445 100836378 100837710
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