Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106352658   zinc finger CCHC domain-containing protein 8 
 bna-r.1   106378853   uncharacterized LOC106378853 
 bna-r.1   BNAC02G17280D   uncharacterized BNAC02G17280D 
 bna-r.1   106391944   uncharacterized LOC106391944 
 bra-r.6   103852381   uncharacterized LOC103852381 
 bra-r.6   103850124   zinc finger CCHC domain-containing protein 8 
 ath-u.5   AT5G38600   Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein 
 ath-u.5   AT1G67210   Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein 
 ghi-r.1   107893182   uncharacterized LOC107893182 
 ghi-r.1   107936855   zinc finger CCHC domain-containing protein 8 
 cit-r.1   102626617   uncharacterized LOC102626617 
 gma-u.5   100805423   uncharacterized LOC100805423 
 gma-u.5   100782251   uncharacterized LOC100782251 
 gma-u.5   100527170   PSP domain-containing protein 
 vvi-u.5   100247996   uncharacterized LOC100247996 
 vvi-u.5   100267904   uncharacterized LOC100267904 
 ppo-u.5   18107409   uncharacterized LOC18107409 
 ppo-u.5   7494553   uncharacterized LOC7494553 
 mtr-u.5   25495576   uncharacterized LOC25495576 
 sly-u.5   101255771   uncharacterized LOC101255771 
 sot-r.1   102582187   uncharacterized LOC102582187 
 nta-r.1   107778684   uncharacterized LOC107778684 
 nta-r.1   107772086   uncharacterized LOC107772086 
 osa-u.5   4341097   uncharacterized LOC4341097 
 zma-u.5   100282695   nucleic acid binding protein 
 tae-r.2   123090465   uncharacterized LOC123090465 
 tae-r.2   123090463   zinc finger CCHC domain-containing protein 8 
 tae-r.2   123095548   uncharacterized LOC123095548 
 hvu-r.1   123446789   zinc finger CCHC domain-containing protein 8-like 
 sbi-r.1   8068899   uncharacterized LOC8068899 
 bdi-r.1   100833249   uncharacterized LOC100833249 
 cre-r.1   CHLRE_07g340550v5   uncharacterized protein 

close


Top 50 coexpressed genes to 106352658 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106352658 (bna-r.1 coexpression data)

CoexMap"106352658"


bnaLOC106352658 | Entrez gene ID : 106352658    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 2 1 3 2 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (222 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013647740.2 [sequence] [blastp]
XP_013647742.2 [sequence] [blastp]
XP_048592873.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013647740.2)
nucl 10  (predict for XP_013647742.2)
nucl 10  (predict for XP_048592873.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013647740.2)
other 8  (predict for XP_013647742.2)
other 8  (predict for XP_048592873.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106352658
bna-r.1
for
106378853
bna-r.1
for
BNAC02G17280D
bna-r.1
for
106391944
bra-r.6
for
103852381
bra-r.6
for
103850124
ath-u.5
for
AT5G38600
ath-u.5
for
AT1G67210
ghi-r.1
for
107893182
ghi-r.1
for
107936855
cit-r.1
for
102626617
gma-u.5
for
100805423
gma-u.5
for
100782251
gma-u.5
for
100527170
vvi-u.5
for
100247996
vvi-u.5
for
100267904
ppo-u.5
for
18107409
ppo-u.5
for
7494553
mtr-u.5
for
25495576
sly-u.5
for
101255771
sot-r.1
for
102582187
nta-r.1
for
107778684
nta-r.1
for
107772086
osa-u.5
for
4341097
zma-u.5
for
100282695
tae-r.2
for
123090465
tae-r.2
for
123090463
tae-r.2
for
123095548
hvu-r.1
for
123446789
sbi-r.1
for
8068899
bdi-r.1
for
100833249
cre-r.1
for
CHLRE_07g340550v5


Ortholog ID: 6662
Species bna bna bna bra bra ath ath ghi ghi cit gma gma gma vvi vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106352658 LOC106378853 LOC106391944 LOC103852381 LOC103850124 AT5G38600 AT1G67210 LOC107893182 LOC107936855 LOC102626617 LOC100805423 LOC100782251 LOC100527170 LOC100247996 LOC100267904 LOC18107409 LOC7494553 LOC25495576 LOC101255771 LOC102582187 LOC107778684 LOC107772086 LOC4341097 LOC100282695 LOC123090465 LOC123090463 LOC123084666 LOC123446789 LOC8068899 LOC100833249 CHLRE_07g340550v5
Function* zinc finger CCHC domain-containing protein 8 uncharacterized LOC106378853 uncharacterized LOC106391944 uncharacterized LOC103852381 zinc finger CCHC domain-containing protein 8 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein uncharacterized LOC107893182 zinc finger CCHC domain-containing protein 8 uncharacterized LOC102626617 uncharacterized LOC100805423 uncharacterized LOC100782251 PSP domain-containing protein uncharacterized LOC100247996 uncharacterized LOC100267904 uncharacterized LOC18107409 uncharacterized LOC7494553 uncharacterized LOC25495576 uncharacterized LOC101255771 uncharacterized LOC102582187 uncharacterized LOC107778684 uncharacterized LOC107772086 uncharacterized LOC4341097 nucleic acid binding protein uncharacterized LOC123090465 zinc finger CCHC domain-containing protein 8 uncharacterized LOC123084666 zinc finger CCHC domain-containing protein 8-like uncharacterized LOC8068899 uncharacterized LOC100833249 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 8
bna03250 Viral life cycle - HIV-1 4
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03050 Proteasome 4
bna03040 Spliceosome 3
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
cit03013 Nucleocytoplasmic transport 3
cit03015 mRNA surveillance pathway 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106352658 106378853 106391944 103852381 103850124 833850 843041 107893182 107936855 102626617 100805423 100782251 100527170 100247996 100267904 18107409 7494553 25495576 101255771 102582187 107778684 107772086 4341097 100282695 123090465 123090463 123084666 123446789 8068899 100833249 66054111
The preparation time of this page was 0.2 [sec].