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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106362415   nuclear pore complex protein NUP98A 
 bna-r.1   106346202   nuclear pore complex protein NUP98A 
 bna-r.1   106453101   nuclear pore complex protein NUP98A-like 
 bna-r.1   106434979   nuclear pore complex protein NUP98B 
 bra-r.6   103838591   nuclear pore complex protein NUP98B 
 bra-r.6   103871810   nuclear pore complex protein NUP98A 
 bra-r.6   103868097   nuclear pore complex protein NUP98A 
 ath-u.5   AT1G10390   Nucleoporin autopeptidase 
 ath-u.5   AT1G59660   Nucleoporin autopeptidase 
 ghi-r.1   107937282   nuclear pore complex protein NUP98A 
 ghi-r.1   107951188   nuclear pore complex protein NUP98A 
 ghi-r.1   107950120   nuclear pore complex protein NUP98A 
 cit-r.1   102616555   nuclear pore complex protein NUP98A-like 
 cit-r.1   102620159   nuclear pore complex protein NUP98A 
 gma-u.5   102668982   nuclear pore complex protein NUP98A 
 gma-u.5   100786534   nuclear pore complex protein NUP98A 
 gma-u.5   100789177   nuclear pore complex protein NUP98A 
 vvi-u.5   100249633   nuclear pore complex protein NUP98A 
 ppo-u.5   7455018   nuclear pore complex protein NUP98A 
 ppo-u.5   18096000   nuclear pore complex protein NUP98A 
 mtr-u.5   25484578   nuclear pore complex protein NUP98A 
 mtr-u.5   120577436   nuclear pore complex protein NUP98A 
 sly-u.5   101245750   nuclear pore complex protein NUP98A 
 sot-r.1   102592631   nuclear pore complex protein NUP98A 
 nta-r.1   107767733   nuclear pore complex protein NUP98A 
 nta-r.1   107823658   nuclear pore complex protein NUP98A-like 
 osa-u.5   4351597   nuclear pore complex protein NUP98A 
 osa-u.5   4351598   nuclear pore complex protein NUP98A 
 zma-u.5   101202711   Nuclear pore complex protein NUP98A 
 zma-u.5   100279429   uncharacterized LOC100279429 
 tae-r.2   123069550   nuclear pore complex protein NUP98A 
 tae-r.2   123078034   nuclear pore complex protein NUP98A 
 tae-r.2   123086289   nuclear pore complex protein NUP98A 
 hvu-r.1   123443381   nuclear pore complex protein NUP98A-like 
 hvu-r.1   123448128   nuclear pore complex protein NUP98A-like 
 sbi-r.1   110429746   nuclear pore complex protein NUP98A-like 
 sbi-r.1   8073687   nuclear pore complex protein NUP98A 
 bdi-r.1   100833671   nuclear pore complex protein NUP98A 
 bdi-r.1   100821753   nuclear pore complex protein NUP98A 
 cre-r.1   CHLRE_02g086887v5   uncharacterized protein 

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Top 50 coexpressed genes to 106362415 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106362415 (bna-r.1 coexpression data)

CoexMap"106362415"


bnaLOC106362415 | Entrez gene ID : 106362415    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 2 3 1 2 2 1 1 2 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03013 [list] [network] Nucleocytoplasmic transport (328 genes)
GO BP
GO:0000973 [list] [network] post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery  (18 genes)  IEA  
GO:0006405 [list] [network] RNA export from nucleus  (144 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (145 genes)  IEA  
GO CC
GO:0044614 [list] [network] nuclear pore cytoplasmic filaments  (12 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (143 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (60 genes)  IEA  
Protein XP_013657759.1 [sequence] [blastp]
XP_022546135.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_013657759.1)
chlo 6,  nucl 4  (predict for XP_022546135.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013657759.1)
chlo 8  (predict for XP_022546135.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106362415
bna-r.1
for
106346202
bna-r.1
for
106453101
bna-r.1
for
106434979
bra-r.6
for
103838591
bra-r.6
for
103871810
bra-r.6
for
103868097
ath-u.5
for
AT1G10390
ath-u.5
for
AT1G59660
ghi-r.1
for
107937282
ghi-r.1
for
107951188
ghi-r.1
for
107950120
cit-r.1
for
102616555
cit-r.1
for
102620159
gma-u.5
for
102668982
gma-u.5
for
100786534
gma-u.5
for
100789177
vvi-u.5
for
100249633
ppo-u.5
for
7455018
ppo-u.5
for
18096000
mtr-u.5
for
25484578
mtr-u.5
for
120577436
sly-u.5
for
101245750
sot-r.1
for
102592631
nta-r.1
for
107767733
nta-r.1
for
107823658
osa-u.5
for
4351597
osa-u.5
for
4351598
zma-u.5
for
101202711
zma-u.5
for
100279429
tae-r.2
for
123069550
tae-r.2
for
123078034
tae-r.2
for
123086289
hvu-r.1
for
123443381
hvu-r.1
for
123448128
sbi-r.1
for
110429746
sbi-r.1
for
8073687
bdi-r.1
for
100833671
bdi-r.1
for
100821753
cre-r.1
for
CHLRE_02g086887v5


Ortholog ID: 3633
Species bna bna bna bra bra bra ath ath ghi ghi ghi cit cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106362415 LOC106453101 LOC106350452 LOC103838591 LOC103871810 LOC103868097 AT1G10390 AT1G59660 LOC107937282 LOC107947034 LOC107904534 LOC102616555 LOC102620159 LOC102668982 LOC100786534 LOC100789177 LOC100249633 LOC7455018 LOC18096000 LOC25484578 LOC120577436 LOC101245750 LOC102592631 LOC107767733 LOC107823658 LOC4351597 LOC4351598 LOC101202711 LOC100279429 LOC123069550 LOC123078034 LOC123091721 LOC123443381 LOC123448128 LOC110429746 LOC8073687 LOC100833671 LOC100821753 CHLRE_02g086887v5
Function* nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A-like nuclear pore complex protein NUP98A nuclear pore complex protein NUP98B nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A Nucleoporin autopeptidase Nucleoporin autopeptidase nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A-like nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A-like nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A Nuclear pore complex protein NUP98A uncharacterized LOC100279429 nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A-like nuclear pore complex protein NUP98A-like nuclear pore complex protein NUP98A-like nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A nuclear pore complex protein NUP98A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra03008 Ribosome biogenesis in eukaryotes 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03015 mRNA surveillance pathway 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 6
ath03008 Ribosome biogenesis in eukaryotes 4
ath03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106362415 106453101 106350452 103838591 103871810 103868097 837579 842256 107937282 107947034 107904534 102616555 102620159 102668982 100786534 100789177 100249633 7455018 18096000 25484578 120577436 101245750 102592631 107767733 107823658 4351597 4351598 101202711 100279429 123069550 123078034 123091721 123443381 123448128 110429746 8073687 100833671 100821753 5727409
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