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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106368174   E3 ubiquitin-protein ligase SINAT2 
 bna-r.1   106440824   E3 ubiquitin-protein ligase SINAT4 
 bna-r.1   106412203   E3 ubiquitin-protein ligase SINAT4 
 bna-r.1   106412007   E3 ubiquitin-protein ligase SINAT4 
 bra-r.6   103858006   putative E3 ubiquitin-protein ligase SINAT1 
 bra-r.6   103867677   E3 ubiquitin-protein ligase SINAT4 
 bra-r.6   103830135   E3 ubiquitin-protein ligase SINAT2 
 ath-u.5   AT2G41980   Protein with RING/U-box and TRAF-like domain 
 ath-u.5   SINAT2   uncharacterized protein 
 ath-u.5   AT3G61790   Protein with RING/U-box and TRAF-like domain 
 ghi-r.1   107916315   E3 ubiquitin-protein ligase DIS1 
 ghi-r.1   107935481   E3 ubiquitin-protein ligase SINAT2 
 ghi-r.1   107921233   E3 ubiquitin-protein ligase SINAT2 
 cit-r.1   102619672   E3 ubiquitin-protein ligase SINAT2 
 cit-r.1   127898595   E3 ubiquitin-protein ligase SINAT3 
 cit-r.1   102624862   E3 ubiquitin-protein ligase DIS1-like 
 gma-u.5   100813966   E3 ubiquitin-protein ligase SINAT2-like 
 gma-u.5   100810573   E3 ubiquitin-protein ligase SINAT3-like 
 gma-u.5   100793457   E3 ubiquitin-protein ligase DIS1 
 vvi-u.5   100244678   E3 ubiquitin-protein ligase DIS1 
 vvi-u.5   100267231   E3 ubiquitin-protein ligase SINAT2 
 vvi-u.5   100252009   E3 ubiquitin-protein ligase SINAT5 
 ppo-u.5   7463600   E3 ubiquitin-protein ligase SINAT2 
 ppo-u.5   7476852   E3 ubiquitin-protein ligase DIS1 
 ppo-u.5   7479519   E3 ubiquitin-protein ligase SINAT2 
 mtr-u.5   25500674   E3 ubiquitin-protein ligase SINAT3 
 mtr-u.5   25499735   E3 ubiquitin-protein ligase SINAT5 
 mtr-u.5   25483549   E3 ubiquitin-protein ligase SINAT2 
 sly-u.5   SINA4   E3 ubiquitin ligase SINA4 
 sly-u.5   101253831   E3 ubiquitin ligase SINA2 
 sly-u.5   101264159   E3 ubiquitin ligase SINA6 
 sot-r.1   102599941   E3 ubiquitin-protein ligase SINAT5-like 
 sot-r.1   102601918   E3 ubiquitin-protein ligase SINAT5-like 
 sot-r.1   102598328   E3 ubiquitin-protein ligase SINAT3 
 nta-r.1   107827560   E3 ubiquitin-protein ligase SINAT5 
 nta-r.1   107794971   E3 ubiquitin-protein ligase SINAT3 
 nta-r.1   107802688   E3 ubiquitin-protein ligase SINAT3-like 
 osa-u.5   9266295   E3 ubiquitin-protein ligase DIS1-like 
 osa-u.5   4327774   E3 ubiquitin-protein ligase SINAT5 
 osa-u.5   4344172   E3 ubiquitin-protein ligase DIS1-like 
 zma-u.5   100170241   uncharacterized LOC100170241 
 zma-u.5   100170242   uncharacterized LOC100170242 
 zma-u.5   100170243   uncharacterized LOC100170243 
 tae-r.2   123077898   E3 ubiquitin-protein ligase SINAT5 
 tae-r.2   123043499   E3 ubiquitin-protein ligase SINAT5 
 tae-r.2   123147734   E3 ubiquitin-protein ligase SINAT5 
 hvu-r.1   123443282   E3 ubiquitin-protein ligase SINAT5-like 
 hvu-r.1   123424892   E3 ubiquitin-protein ligase DIS1 
 hvu-r.1   123407757   E3 ubiquitin-protein ligase SINAT5-like 
 sbi-r.1   8080816   E3 ubiquitin-protein ligase SINAT3 
 sbi-r.1   8077555   E3 ubiquitin-protein ligase SINAT3 
 sbi-r.1   8073139   E3 ubiquitin-protein ligase SINAT5 
 bdi-r.1   100822426   E3 ubiquitin-protein ligase SINAT5 
 bdi-r.1   100826252   E3 ubiquitin-protein ligase SINAT5 
 bdi-r.1   100832893   E3 ubiquitin-protein ligase DIS1 

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Top 50 coexpressed genes to 106368174 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106368174 (bna-r.1 coexpression data)

CoexMap"106368174"


bnaLOC106368174 | Entrez gene ID : 106368174    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04120 [list] [network] Ubiquitin mediated proteolysis (476 genes)
GO BP
GO:0007275 [list] [network] multicellular organism development  (716 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (910 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013663529.1 [sequence] [blastp]
XP_048597198.1 [sequence] [blastp]
XP_048597199.1 [sequence] [blastp]
XP_048597200.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 3  (predict for XP_013663529.1)
chlo 4,  cyto 4,  nucl 3  (predict for XP_048597198.1)
chlo 4,  cyto 4,  nucl 3  (predict for XP_048597199.1)
chlo 4,  cyto 4,  nucl 3  (predict for XP_048597200.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013663529.1)
other 8  (predict for XP_048597198.1)
other 8  (predict for XP_048597199.1)
other 8  (predict for XP_048597200.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106368174
bna-r.1
for
106440824
bna-r.1
for
106412203
bna-r.1
for
106412007
bra-r.6
for
103858006
bra-r.6
for
103867677
bra-r.6
for
103830135
ath-u.5
for
AT2G41980
ath-u.5
for
SINAT2
ath-u.5
for
AT3G61790
ghi-r.1
for
107916315
ghi-r.1
for
107935481
ghi-r.1
for
107921233
cit-r.1
for
102619672
cit-r.1
for
127898595
cit-r.1
for
102624862
gma-u.5
for
100813966
gma-u.5
for
100810573
gma-u.5
for
100793457
vvi-u.5
for
100244678
vvi-u.5
for
100267231
vvi-u.5
for
100252009
ppo-u.5
for
7463600
ppo-u.5
for
7476852
ppo-u.5
for
7479519
mtr-u.5
for
25500674
mtr-u.5
for
25499735
mtr-u.5
for
25483549
sly-u.5
for
SINA4
sly-u.5
for
101253831
sly-u.5
for
101264159
sot-r.1
for
102599941
sot-r.1
for
102601918
sot-r.1
for
102598328
nta-r.1
for
107827560
nta-r.1
for
107794971
nta-r.1
for
107802688
osa-u.5
for
9266295
osa-u.5
for
4327774
osa-u.5
for
4344172
zma-u.5
for
100170241
zma-u.5
for
100170242
zma-u.5
for
100170243
tae-r.2
for
123077898
tae-r.2
for
123043499
tae-r.2
for
123147734
hvu-r.1
for
123443282
hvu-r.1
for
123424892
hvu-r.1
for
123407757
sbi-r.1
for
8080816
sbi-r.1
for
8077555
sbi-r.1
for
8073139
bdi-r.1
for
100822426
bdi-r.1
for
100826252
bdi-r.1
for
100832893


Ortholog ID: 342
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC106388271 LOC111215125 LOC106428173 LOC103867677 LOC103830327 LOC103862812 AT2G41980 AT3G61790 AT5G53360 LOC107916315 LOC107940377 LOC107916308 LOC102619672 LOC102624862 LOC102623798 LOC100810573 LOC100792687 LOC100500061 LOC100252009 LOC100233085 LOC100233084 LOC7486772 LOC7455750 LOC25500674 LOC25499735 LOC25483549 LOC101264159 LOC101246723 SlSINA1 LOC102599941 LOC102602506 LOC102602007 LOC107794971 LOC107773987 LOC107784733 LOC4327774 LOC4329066 LOC4338181 LOC100170241 LOC100170242 LOC100170243 LOC123077898 LOC123043860 LOC123165457 LOC123443282 LOC123424892 LOC123428647 LOC8080816 LOC8073139 LOC8058290 LOC100826252 LOC100832893 LOC100833057
Function* putative E3 ubiquitin-protein ligase SINAT1 putative E3 ubiquitin-protein ligase SINAT1 putative E3 ubiquitin-protein ligase SINAT1 E3 ubiquitin-protein ligase SINAT4 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT3 Protein with RING/U-box and TRAF-like domain Protein with RING/U-box and TRAF-like domain TRAF-like superfamily protein E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase DIS1-like E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT3-like E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT5 SINA2p SINA1p E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin ligase SINA6 E3 ubiquitin ligase SINA3 E3 ubiquitin ligase SINA1 E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase SINAT3-like E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT2 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT3 uncharacterized LOC100170241 uncharacterized LOC100170242 uncharacterized LOC100170243 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase SINAT5-like E3 ubiquitin-protein ligase SINAT3 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase SINAT5 E3 ubiquitin-protein ligase DIS1 E3 ubiquitin-protein ligase SINAT5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00220 Arginine biosynthesis 2
bna00230 Purine metabolism 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00280 Valine, leucine and isoleucine degradation 2
bna00640 Propanoate metabolism 2
bna00785 Lipoic acid metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00220 Arginine biosynthesis 2
bna00230 Purine metabolism 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00770 Pantothenate and CoA biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04142 Lysosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03083 Polycomb repressive complex 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04145 Phagosome 2
sly04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
sly04016 MAPK signaling pathway - plant 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00920 Sulfur metabolism 4
sot01320 Sulfur cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 4
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 5
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 2
nta04120 Ubiquitin mediated proteolysis 2
nta00310 Lysine degradation 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma04712 Circadian rhythm - plant 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 8
tae03083 Polycomb repressive complex 5
tae04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04814 Motor proteins 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106388271 111215125 106428173 103867677 103830327 103862812 818798 825352 835417 107916315 107940377 107916308 102619672 102624862 102623798 100810573 100792687 100500061 100252009 100233085 100233084 7486772 7455750 25500674 25499735 25483549 101264159 101246723 101263446 102599941 102602506 102602007 107794971 107773987 107784733 4327774 4329066 4338181 100170241 100170242 100170243 123077898 123043860 123165457 123443282 123424892 123428647 8080816 8073139 8058290 100826252 100832893 100833057
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