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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106376431   DNA-directed RNA polymerase I subunit 1-like 
 bna-r.1   106356841   DNA-directed RNA polymerase I subunit 1-like 
 bna-r.1   106368196   DNA-directed RNA polymerase I subunit 1 
 bra-r.6   103841672   DNA-directed RNA polymerase I subunit 1 
 bra-r.6   103830117   DNA-directed RNA polymerase I subunit 1 
 ath-u.5   NRPA1   nuclear RNA polymerase A1 
 ghi-r.1   107951811   DNA-directed RNA polymerase I subunit 1 
 ghi-r.1   107950708   DNA-directed RNA polymerase I subunit 1 
 cit-r.1   102625708   DNA-directed RNA polymerase I subunit 1 
 gma-u.5   100779532   DNA-directed RNA polymerase I subunit 1 
 vvi-u.5   100250406   DNA-directed RNA polymerase I subunit 1 
 ppo-u.5   18099840   DNA-directed RNA polymerase I subunit 1 
 mtr-u.5   11444522   DNA-directed RNA polymerase I subunit 1 
 sly-u.5   101260591   DNA-directed RNA polymerase I subunit 1 
 sot-r.1   102592134   DNA-directed RNA polymerase I subunit 1 
 nta-r.1   107816097   DNA-directed RNA polymerase I subunit 1 
 nta-r.1   107806552   DNA-directed RNA polymerase I subunit 1 
 osa-u.5   9270399   DNA-directed RNA polymerase I subunit 1 
 zma-u.5   109942860   DNA-directed RNA polymerase I subunit 1 
 zma-u.5   100279825   DNA-directed RNA polymerase I subunit 1 
 tae-r.2   123123657   DNA-directed RNA polymerase I subunit 1 
 tae-r.2   123114167   DNA-directed RNA polymerase I subunit 1 
 tae-r.2   123087765   DNA-directed RNA polymerase I subunit 1 
 hvu-r.1   123394932   DNA-directed RNA polymerase I subunit 1 
 sbi-r.1   8061093   DNA-directed RNA polymerase I subunit 1 
 bdi-r.1   100821444   DNA-directed RNA polymerase I subunit 1 
 cre-r.1   CHLRE_12g529600v5   uncharacterized protein 

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Top 50 coexpressed genes to 106376431 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106376431 (bna-r.1 coexpression data)

CoexMap"106376431"


bnaLOC106376431 | Entrez gene ID : 106376431    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 2 1 1 1 1 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03020 [list] [network] RNA polymerase (161 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (740 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (52 genes)  IEA  
GO MF
GO:0003899 [list] [network] DNA-directed RNA polymerase activity  (117 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013672001.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013672001.2)
Subcellular
localization
TargetP
other 8  (predict for XP_013672001.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106376431
bna-r.1
for
106356841
bna-r.1
for
106368196
bra-r.6
for
103841672
bra-r.6
for
103830117
ath-u.5
for
NRPA1
ghi-r.1
for
107951811
ghi-r.1
for
107950708
cit-r.1
for
102625708
gma-u.5
for
100779532
vvi-u.5
for
100250406
ppo-u.5
for
18099840
mtr-u.5
for
11444522
sly-u.5
for
101260591
sot-r.1
for
102592134
nta-r.1
for
107816097
nta-r.1
for
107806552
osa-u.5
for
9270399
zma-u.5
for
109942860
zma-u.5
for
100279825
tae-r.2
for
123123657
tae-r.2
for
123114167
tae-r.2
for
123087765
hvu-r.1
for
123394932
sbi-r.1
for
8061093
bdi-r.1
for
100821444
cre-r.1
for
CHLRE_12g529600v5


Ortholog ID: 8989
Species bna bna bna bra bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106376431 LOC106356841 LOC106368196 LOC103841672 LOC103830117 NRPA1 LOC107951811 LOC107950708 LOC102625708 LOC100779532 LOC100250406 LOC18099840 LOC11444522 LOC101260591 LOC102592134 LOC107816097 LOC107806552 LOC9270399 LOC109942860 LOC100279825 LOC123123657 LOC123114167 LOC123087765 LOC123394932 LOC8061093 LOC100821444 CHLRE_12g529600v5
Function* DNA-directed RNA polymerase I subunit 1-like DNA-directed RNA polymerase I subunit 1-like DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 nuclear RNA polymerase A1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 DNA-directed RNA polymerase I subunit 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03018 RNA degradation 4
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 8
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 7
tae03018 RNA degradation 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106376431 106356841 106368196 103841672 103830117 824935 107951811 107950708 102625708 100779532 100250406 18099840 11444522 101260591 102592134 107816097 107806552 9270399 109942860 100279825 123123657 123114167 123087765 123394932 8061093 100821444 5722421
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