ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11444522	DNA-directed RNA polymerase I subunit 1
mtr-r.5	11444522	DNA-directed RNA polymerase I subunit 1
mtr-m.5	11444522	DNA-directed RNA polymerase I subunit 1
gma-u.5	100779532	DNA-directed RNA polymerase I subunit 1
ppo-u.5	18099840	DNA-directed RNA polymerase I subunit 1
ath-u.5	NRPA1	nuclear RNA polymerase A1
vvi-u.5	100250406	DNA-directed RNA polymerase I subunit 1
sly-u.5	101260591	DNA-directed RNA polymerase I subunit 1
osa-u.5	9270399	DNA-directed RNA polymerase I subunit 1
zma-u.5	109942860	DNA-directed RNA polymerase I subunit 1
zma-u.5	100279825	DNA-directed RNA polymerase I subunit 1

functional annotation

KEGG

mtr03020 [list] [network] RNA polymerase (74 genes)

GO BP

GO:0006351 [list] [network] DNA-templated transcription

(265 genes)

IEA

GO CC

GO:0005736 [list] [network] RNA polymerase I complex

(26 genes)

IEA

GO MF

GO:0003677 [list] [network] DNA binding

(2104 genes)

IEA

Protein

XP_003607990.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_003607990.1)

Subcellular
localization
TargetP

other 5, chlo 4

(predict for XP_003607990.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11444522 .	mtr-r.5 for 11444522 .	mtr-m.5 for 11444522 .	gma-u.5 for 100779532 .	ppo-u.5 for 18099840 .	ath-u.5 for NRPA1 .	vvi-u.5 for 100250406 .	sly-u.5 for 101260591 .	osa-u.5 for 9270399 .	zma-u.5 for 109942860 .	zma-u.5 for 100279825 .

Ortholog ID: 8989

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

NRPA1

Function^*

nuclear RNA polymerase A1

DNA-directed RNA polymerase I subunit 1

DNA-directed RNA polymerase I subunit 1-like

DNA-directed RNA polymerase I subunit 1

uncharacterized protein

DNA-directed RNA polymerase I subunit 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	8
ath03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	4
sly03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	5
osa03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5
bra03018	RNA degradation	4
bra03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03020	RNA polymerase	3
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4
mtr03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	5
tae03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	7
tae03018	RNA degradation	3
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	4
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	6
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	4
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03020	RNA polymerase	2
sot00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	5
bdi03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	7
nta03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

824935

100779532

101260591

9270399

100279825

109942860

103830117

103841672

100250406

18099840

11444522

123087765

123114167

123394932

107950708

107951811

106356841

106368196

5722421

8061093

102592134

102625708

100821444

107806552

107816097

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11444522 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11444522 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	sbi	nta	bra	cre	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	3	1	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11444522 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11444522 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**