ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	BNAC02G11940D	pathogen-associated molecular patterns-induced protein A70
bna-r.1	BNAC01G18140D	pathogen-associated molecular patterns-induced protein A70
bna-r.1	106371488	pathogen-associated molecular patterns-induced protein A70-like
bna-r.1	106389377	pathogen-associated molecular patterns-induced protein A70-like
bra-r.6	103863917	pathogen-associated molecular patterns-induced protein A70
bra-r.6	103851795	pathogen-associated molecular patterns-induced protein A70
bra-r.6	103845132	pathogen-associated molecular patterns-induced protein A70-like
ath-u.5	AT2G26110	bromodomain protein (DUF761)
ath-u.5	AT4G26130	cotton fiber protein
ath-u.5	AT5G56980	cotton fiber protein
ghi-r.1	107962851	pathogen-associated molecular patterns-induced protein A70
ghi-r.1	107953887	pathogen-associated molecular patterns-induced protein A70
ghi-r.1	107932213	pathogen-associated molecular patterns-induced protein A70
cit-r.1	102625532	pathogen-associated molecular patterns-induced protein A70
cit-r.1	102610165	pathogen-associated molecular patterns-induced protein A70
gma-u.5	100775337	pathogen-associated molecular patterns-induced protein A70
gma-u.5	100781094	pathogen-associated molecular patterns-induced protein A70
gma-u.5	102664184	pathogen-associated molecular patterns-induced protein A70
vvi-u.5	100249297	pathogen-associated molecular patterns-induced protein A70
vvi-u.5	100247359	pathogen-associated molecular patterns-induced protein A70
ppo-u.5	7462259	pathogen-associated molecular patterns-induced protein A70
ppo-u.5	7476653	pathogen-associated molecular patterns-induced protein A70
ppo-u.5	7484676	pathogen-associated molecular patterns-induced protein A70
mtr-u.5	25494230	pathogen-associated molecular patterns-induced protein A70
mtr-u.5	25494233	pathogen-associated molecular patterns-induced protein A70
mtr-u.5	11411531	pathogen-associated molecular patterns-induced protein A70
sly-u.5	101244302	uncharacterized LOC101244302
sly-u.5	101258979	pathogen-associated molecular patterns-induced protein A70
sot-r.1	102597801	sex-determining region Y protein-like
sot-r.1	102602872	uncharacterized LOC102602872
nta-r.1	107790886	uncharacterized LOC107790886
nta-r.1	107813775	uncharacterized LOC107813775
nta-r.1	107816078	uncharacterized LOC107816078
osa-u.5	4341332	uncharacterized LOC4341332
osa-u.5	4339469	pathogen-associated molecular patterns-induced protein A70
osa-u.5	4327827	pathogen-associated molecular patterns-induced protein A70
zma-u.5	100279454	uncharacterized LOC100279454
tae-r.2	123160636	pathogen-associated molecular patterns-induced protein A70
tae-r.2	123065195	pathogen-associated molecular patterns-induced protein A70
hvu-r.1	123411516	pathogen-associated molecular patterns-induced protein A70-like
sbi-r.1	8061076	serine/arginine repetitive matrix protein 1
sbi-r.1	8076739	ESX-1 secretion-associated protein EspK
bdi-r.1	100823254	uncharacterized LOC100823254
bdi-r.1	100829968	uncharacterized LOC100829968
bdi-r.1	100832635	putative uncharacterized protein DDB_G0291608

Top 50 coexpressed genes to BNAC02G11940D (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to BNAC02G11940D (bna-r.1 coexpression data)

CoexMap"106377547"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_022551663.1 [sequence] [blastp]
XP_048603070.1 [sequence] [blastp]
XP_048603071.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1, cyto 1, extr 1, cyto_nucl 1	(predict for XP_022551663.1)
chlo 8, nucl 1, cyto 1, extr 1, cyto_nucl 1	(predict for XP_048603070.1)
chlo 8, nucl 1, cyto 1, extr 1, cyto_nucl 1	(predict for XP_048603071.1)

Subcellular
localization
TargetP

scret 4	(predict for XP_022551663.1)
scret 4	(predict for XP_048603070.1)
scret 4	(predict for XP_048603071.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for BNAC02G11940D	bna-r.1 for BNAC01G18140D	bna-r.1 for 106371488	bna-r.1 for 106389377	bra-r.6 for 103863917	bra-r.6 for 103851795	bra-r.6 for 103845132	ath-u.5 for AT2G26110	ath-u.5 for AT4G26130	ath-u.5 for AT5G56980	ghi-r.1 for 107962851	ghi-r.1 for 107953887	ghi-r.1 for 107932213	cit-r.1 for 102625532	cit-r.1 for 102610165	gma-u.5 for 100775337	gma-u.5 for 100781094	gma-u.5 for 102664184	vvi-u.5 for 100249297	vvi-u.5 for 100247359	ppo-u.5 for 7462259	ppo-u.5 for 7476653	ppo-u.5 for 7484676	mtr-u.5 for 25494230	mtr-u.5 for 25494233	mtr-u.5 for 11411531	sly-u.5 for 101244302	sly-u.5 for 101258979	sot-r.1 for 102597801	sot-r.1 for 102602872	nta-r.1 for 107790886	nta-r.1 for 107813775	nta-r.1 for 107816078	osa-u.5 for 4341332	osa-u.5 for 4339469	osa-u.5 for 4327827	zma-u.5 for 100279454	tae-r.2 for 123160636	tae-r.2 for 123065195	hvu-r.1 for 123411516	sbi-r.1 for 8061076	sbi-r.1 for 8076739	bdi-r.1 for 100823254	bdi-r.1 for 100829968	bdi-r.1 for 100832635

Ortholog

Ortholog ID: 1607

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

pathogen-associated molecular patterns-induced protein A70

pathogen-associated molecular patterns-induced protein A70-like

pathogen-associated molecular patterns-induced protein A70

bromodomain protein (DUF761)

cotton fiber protein

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC101244302

pathogen-associated molecular patterns-induced protein A70

sex-determining region Y protein-like

uncharacterized LOC102602872

uncharacterized LOC107790886

uncharacterized LOC107816078

uncharacterized LOC107832648

uncharacterized LOC4341332

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC100279454

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC123167760

pathogen-associated molecular patterns-induced protein A70

pathogen-associated molecular patterns-induced protein A70-like

serine/arginine repetitive matrix protein 1

ESX-1 secretion-associated protein EspK

uncharacterized LOC100823254

uncharacterized LOC100829968

putative uncharacterized protein DDB_G0291608

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr03060	Protein export	3
mtr04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	4
sly00260	Glycine, serine and threonine metabolism	2
sly00630	Glyoxylate and dicarboxylate metabolism	2
sly00710	Carbon fixation by Calvin cycle	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	5
nta00941	Flavonoid biosynthesis	4
nta00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3
osa00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4
zma04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00062	Fatty acid elongation	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	3
bdi04075	Plant hormone signal transduction	3
bdi00100	Steroid biosynthesis	3

Expression

Expression pattern

Entrez Gene ID^*

106377547

106396461

106406776

103851795

103845132

103841385

817151

828719

835800

107929877

107894802

102625532

102610165

100775337

100781094

102670321

100249297

100247359

7462259

7476653

7484676

25494230

25494233

11411531

101244302

101258979

102597801

102602872

107790886

107816078

107832648

4341332

4339469

4327827

100279454

123160636

123167760

123159809

123411516

123417211

8061076

8076739

100823254

100829968

100832635

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Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	3	2	3	3	2	2	3	3	1	2	1	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to BNAC02G11940D (bna-r.1 coexpression data)

Top 50 enrichment test to BNAC02G11940D (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**