ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4339469	pathogen-associated molecular patterns-induced protein A70
osa-r.6	4339469	pathogen-associated molecular patterns-induced protein A70
osa-e.1	4339469	pathogen-associated molecular patterns-induced protein A70
osa-u.5	4341332	uncharacterized LOC4341332
osa-u.5	4327827	pathogen-associated molecular patterns-induced protein A70
tae-r.2	123065195	pathogen-associated molecular patterns-induced protein A70
tae-r.2	123160636	pathogen-associated molecular patterns-induced protein A70
tae-r.2	123151794	uncharacterized LOC123151794
hvu-r.1	123411516	pathogen-associated molecular patterns-induced protein A70-like
bdi-r.1	100823254	uncharacterized LOC100823254
bdi-r.1	100829968	uncharacterized LOC100829968
bdi-r.1	100832635	putative uncharacterized protein DDB_G0291608
zma-u.5	100279454	uncharacterized LOC100279454
sbi-r.1	8076739	ESX-1 secretion-associated protein EspK
sbi-r.1	8061076	serine/arginine repetitive matrix protein 1
ath-u.5	AT2G26110	bromodomain protein (DUF761)
ath-u.5	AT4G26130	cotton fiber protein
ath-u.5	AT5G56980	cotton fiber protein
gma-u.5	100781094	pathogen-associated molecular patterns-induced protein A70
gma-u.5	100775337	pathogen-associated molecular patterns-induced protein A70
gma-u.5	102664184	pathogen-associated molecular patterns-induced protein A70
sly-u.5	101244302	uncharacterized LOC101244302
sly-u.5	101258979	pathogen-associated molecular patterns-induced protein A70
bra-r.6	103863917	pathogen-associated molecular patterns-induced protein A70
bra-r.6	103845132	pathogen-associated molecular patterns-induced protein A70-like
bra-r.6	103851795	pathogen-associated molecular patterns-induced protein A70
vvi-u.5	100249297	pathogen-associated molecular patterns-induced protein A70
vvi-u.5	100247359	pathogen-associated molecular patterns-induced protein A70
ppo-u.5	7462259	pathogen-associated molecular patterns-induced protein A70
ppo-u.5	7476653	pathogen-associated molecular patterns-induced protein A70
ppo-u.5	7484676	pathogen-associated molecular patterns-induced protein A70
mtr-u.5	25494230	pathogen-associated molecular patterns-induced protein A70
mtr-u.5	11411531	pathogen-associated molecular patterns-induced protein A70
mtr-u.5	25494233	pathogen-associated molecular patterns-induced protein A70
ghi-r.1	107962851	pathogen-associated molecular patterns-induced protein A70
ghi-r.1	107953887	pathogen-associated molecular patterns-induced protein A70
ghi-r.1	107932213	pathogen-associated molecular patterns-induced protein A70
bna-r.1	BNAC01G18140D	pathogen-associated molecular patterns-induced protein A70
bna-r.1	BNAC02G11940D	pathogen-associated molecular patterns-induced protein A70
bna-r.1	106371488	pathogen-associated molecular patterns-induced protein A70-like
sot-r.1	102597801	sex-determining region Y protein-like
sot-r.1	102602872	uncharacterized LOC102602872
cit-r.1	102610165	pathogen-associated molecular patterns-induced protein A70
cit-r.1	102625532	pathogen-associated molecular patterns-induced protein A70
nta-r.1	107813775	uncharacterized LOC107813775
nta-r.1	107793370	uncharacterized LOC107793370
nta-r.1	107816078	uncharacterized LOC107816078

Top 50 coexpressed genes to 4339469 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4339469 (osa-u.5 coexpression data)

CoexMap"4339469"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_015637519.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 2, E.R._plas 2, mito 1, extr 1, vacu 1, cyto 1, E.R. 1, chlo_mito 1, cyto_pero 1

(predict for XP_015637519.1)

Subcellular
localization
TargetP

other 5

(predict for XP_015637519.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4339469	osa-r.6 for 4339469	osa-e.1 for 4339469	osa-u.5 for 4341332	osa-u.5 for 4327827	tae-r.2 for 123065195	tae-r.2 for 123160636	tae-r.2 for 123151794	hvu-r.1 for 123411516	bdi-r.1 for 100823254	bdi-r.1 for 100829968	bdi-r.1 for 100832635	zma-u.5 for 100279454	sbi-r.1 for 8076739	sbi-r.1 for 8061076	ath-u.5 for AT2G26110	ath-u.5 for AT4G26130	ath-u.5 for AT5G56980	gma-u.5 for 100781094	gma-u.5 for 100775337	gma-u.5 for 102664184	sly-u.5 for 101244302	sly-u.5 for 101258979	bra-r.6 for 103863917	bra-r.6 for 103845132	bra-r.6 for 103851795	vvi-u.5 for 100249297	vvi-u.5 for 100247359	ppo-u.5 for 7462259	ppo-u.5 for 7476653	ppo-u.5 for 7484676	mtr-u.5 for 25494230	mtr-u.5 for 11411531	mtr-u.5 for 25494233	ghi-r.1 for 107962851	ghi-r.1 for 107953887	ghi-r.1 for 107932213	bna-r.1 for BNAC01G18140D	bna-r.1 for BNAC02G11940D	bna-r.1 for 106371488	sot-r.1 for 102597801	sot-r.1 for 102602872	cit-r.1 for 102610165	cit-r.1 for 102625532	nta-r.1 for 107813775	nta-r.1 for 107793370	nta-r.1 for 107816078

Ortholog

Ortholog ID: 1607

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC4341332

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC123167760

pathogen-associated molecular patterns-induced protein A70

pathogen-associated molecular patterns-induced protein A70-like

uncharacterized LOC100823254

uncharacterized LOC100829968

putative uncharacterized protein DDB_G0291608

uncharacterized LOC100279454

ESX-1 secretion-associated protein EspK

serine/arginine repetitive matrix protein 1

bromodomain protein (DUF761)

cotton fiber protein

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC101244302

pathogen-associated molecular patterns-induced protein A70

pathogen-associated molecular patterns-induced protein A70-like

pathogen-associated molecular patterns-induced protein A70

sex-determining region Y protein-like

uncharacterized LOC102602872

pathogen-associated molecular patterns-induced protein A70

uncharacterized LOC107816078

uncharacterized LOC107832648

uncharacterized LOC107790886

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3
osa00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00062	Fatty acid elongation	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	3
bdi04075	Plant hormone signal transduction	3
bdi00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4
zma04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	4
sly00260	Glycine, serine and threonine metabolism	2
sly00630	Glyoxylate and dicarboxylate metabolism	2
sly00710	Carbon fixation by Calvin cycle	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr03060	Protein export	3
mtr04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	5
nta00941	Flavonoid biosynthesis	4
nta00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4

Expression

Expression pattern

Entrez Gene ID^*

4339469

4341332

4327827

123160636

123167760

123159809

123411516

123417211

100823254

100829968

100832635

100279454

8076739

8061076

817151

828719

835800

100781094

100775337

102670321

101244302

101258979

103845132

103851795

103841385

100249297

100247359

7462259

7476653

7484676

25494230

11411531

25494233

107929877

107894802

106396461

106377547

106406776

102597801

102602872

102610165

102625532

107816078

107832648

107790886

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Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	1	3	1	2	3	3	2	3	2	3	3	3	3	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4339469 (osa-u.5 coexpression data)

Top 50 enrichment test to 4339469 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**