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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106388299   50S ribosomal protein L3-1, chloroplastic 
 bna-r.1   125606861   50S ribosomal protein L3-1, chloroplastic 
 bra-r.6   103858043   50S ribosomal protein L3-1, chloroplastic 
 ath-u.5   AT2G43030   Ribosomal protein L3 family protein 
 ghi-r.1   107937726   50S ribosomal protein L3, chloroplastic 
 ghi-r.1   107893116   50S ribosomal protein L3, chloroplastic 
 cit-r.1   102625471   50S ribosomal protein L3, chloroplastic 
 gma-u.5   100809897   50S ribosomal protein L3, chloroplastic-like 
 gma-u.5   100802392   50S ribosomal protein L3, chloroplastic 
 vvi-u.5   100267754   large ribosomal subunit protein uL3c 
 ppo-u.5   7493861   50S ribosomal protein L3, chloroplastic 
 mtr-u.5   11419287   50S ribosomal protein L3, chloroplastic 
 sly-u.5   101247532   large ribosomal subunit protein uL3c 
 sot-r.1   102592271   50S ribosomal protein L3, chloroplastic 
 nta-r.1   107825047   large ribosomal subunit protein uL3c-like 
 nta-r.1   107801195   50S ribosomal protein L3, chloroplastic 
 osa-u.5   4328236   large ribosomal subunit protein uL3c 
 zma-u.5   100193892   50S ribosomal protein L3, chloroplastic-like 
 tae-r.2   123143690   50S ribosomal protein L3, chloroplastic 
 tae-r.2   123132146   50S ribosomal protein L3, chloroplastic 
 tae-r.2   123136179   50S ribosomal protein L3, chloroplastic 
 hvu-r.1   123403412   50S ribosomal protein L3, chloroplastic 
 sbi-r.1   8057538   50S ribosomal protein L3, chloroplastic 
 bdi-r.1   100835651   50S ribosomal protein L3, chloroplastic 
 cre-r.1   CHLRE_48g761197v5   uncharacterized protein 
 cre-r.1   CHLRE_01g050316v5   uncharacterized protein 

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Top 50 coexpressed genes to 106388299 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106388299 (bna-r.1 coexpression data)

CoexMap"106388299"


bnaLOC106388299 | Entrez gene ID : 106388299    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03010 [list] [network] Ribosome (7497 genes)
GO BP
GO:0006412 [list] [network] translation  (1842 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (300 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1367 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1340 genes)  IEA  
Protein XP_013683790.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_013683790.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_013683790.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106388299
bna-r.1
for
125606861
bra-r.6
for
103858043
ath-u.5
for
AT2G43030
ghi-r.1
for
107937726
ghi-r.1
for
107893116
cit-r.1
for
102625471
gma-u.5
for
100809897
gma-u.5
for
100802392
vvi-u.5
for
100267754
ppo-u.5
for
7493861
mtr-u.5
for
11419287
sly-u.5
for
101247532
sot-r.1
for
102592271
nta-r.1
for
107825047
nta-r.1
for
107801195
osa-u.5
for
4328236
zma-u.5
for
100193892
tae-r.2
for
123143690
tae-r.2
for
123132146
tae-r.2
for
123136179
hvu-r.1
for
123403412
sbi-r.1
for
8057538
bdi-r.1
for
100835651
cre-r.1
for
CHLRE_48g761197v5
cre-r.1
for
CHLRE_01g050316v5


Ortholog ID: 9435
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre cre
Symbol LOC106388299 LOC125606861 LOC103858043 AT2G43030 LOC107937726 LOC107893116 LOC102625471 LOC100809897 LOC100802392 LOC100267754 LOC7493861 LOC11419287 LOC101247532 LOC102592271 LOC107825047 LOC107801195 LOC4328236 LOC100193892 LOC123143690 LOC123132146 LOC123136179 LOC123403412 LOC8057538 LOC100835651 CHLRE_48g761197v5 CHLRE_01g050316v5
Function* 50S ribosomal protein L3-1, chloroplastic 50S ribosomal protein L3-1, chloroplastic 50S ribosomal protein L3-1, chloroplastic Ribosomal protein L3 family protein 50S ribosomal protein L3, chloroplastic 50S ribosomal protein L3, chloroplastic 50S ribosomal protein L3, chloroplastic 50S ribosomal protein L3, chloroplastic-like 50S ribosomal protein L3, chloroplastic large ribosomal subunit protein uL3c 50S ribosomal protein L3, chloroplastic 50S ribosomal protein L3, chloroplastic large ribosomal subunit protein uL3c 50S ribosomal protein L3, chloroplastic large ribosomal subunit protein uL3c-like 50S ribosomal protein L3, chloroplastic large ribosomal subunit protein uL3c 50S ribosomal protein L3, chloroplastic-like 50S ribosomal protein L3, chloroplastic 50S ribosomal protein L3, chloroplastic 50S ribosomal protein L3, chloroplastic 50S ribosomal protein L3, chloroplastic 50S ribosomal protein L3, chloroplastic 50S ribosomal protein L3, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
bra00860 Porphyrin metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi00860 Porphyrin metabolism 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 8
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106388299 125606861 103858043 818905 107937726 107893116 102625471 100809897 100802392 100267754 7493861 11419287 101247532 102592271 107825047 107801195 4328236 100193892 123143690 123132146 123136179 123403412 8057538 100835651 5726239 66052160
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