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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106400172  protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 
 ath-u.5  LSH9  LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) 

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Top 50 coexpressed genes to 106400172 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106400172 (bna-r.1 coexpression data)

CoexMap"106400172"


bnaLOC106400172 | Entrez gene ID : 106400172
Species bna ath tae cit ppo sly gma cre vvi nta mtr hvu sot sbi zma ghi bdi bra osa
Paralog 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009299 [list] [network] mRNA transcription  (62 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (379 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_013696020.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013696020.2)
Subcellular
localization
TargetP
chlo 8,  other 5  (predict for XP_013696020.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106400172

.

ath-u.5
for
LSH9

.


Ortholog ID: 19464
Species ath bra bra bna bna
Symbol LSH9 LOC117125638 LOC103861005 LOC106359669 LOC106373242
Function* LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 28720146 117125638 103861005 106359669 106373242
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