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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   117125638   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9-like 
 bra-r.6   103861005   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 
 bna-r.1   106359669   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 
 bna-r.1   106373242   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 
 bna-r.1   106400172   protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 
 ath-u.5   LSH9   LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) 

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Top 50 coexpressed genes to 117125638 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 117125638 (bra-r.6 coexpression data)

CoexMap"117125638"


braLOC117125638 | Entrez gene ID : 117125638    
Species bra bna ath vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr
Paralog 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009299 [list] [network] mRNA transcription  (25 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (177 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO MF
Protein XP_009108375.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_009108375.1)
Subcellular
localization
TargetP
chlo 8,  other 5  (predict for XP_009108375.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
117125638
bra-r.6
for
103861005
bna-r.1
for
106359669
bna-r.1
for
106373242
bna-r.1
for
106400172
ath-u.5
for
LSH9


Ortholog ID: 19464
Species bra bra bna bna bna ath
Symbol LOC117125638 LOC103861005 LOC106359669 LOC106373242 LOC106400172 LSH9
Function* protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9-like protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 117125638 103861005 106359669 106373242 106400172 28720146
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