Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106406033   protein ANTHESIS POMOTING FACTOR 1 
 ath-u.5   AT5G66240   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100810444   protein ANTHESIS POMOTING FACTOR 1 
 gma-u.5   100807825   protein ANTHESIS POMOTING FACTOR 1 
 vvi-u.5   100255744   protein ANTHESIS POMOTING FACTOR 1 
 ppo-u.5   18099200   protein ANTHESIS POMOTING FACTOR 1 
 mtr-u.5   25501403   protein ANTHESIS POMOTING FACTOR 1 
 sly-u.5   101258611   ubiquitin ligase complex subunit 1-like 
 osa-u.5   4343770   protein ANTHESIS POMOTING FACTOR 1 
 zma-u.5   100273578   Set1 complex component swd2 

close


Top 50 coexpressed genes to 106406033 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106406033 (bna-r.1 coexpression data)

CoexMap"106406033"


bnaLOC106406033 | Entrez gene ID : 106406033    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03015 [list] [network] mRNA surveillance pathway (420 genes)
GO BP
GO CC
GO:0048188 [list] [network] Set1C/COMPASS complex  (14 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (399 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048630033.1 [sequence] [blastp]
XP_048630034.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 3,  cyto_nucl 3  (predict for XP_048630033.1)
cyto 4,  nucl 3,  cysk 1,  nucl_plas 1  (predict for XP_048630034.1)
Subcellular
localization
TargetP
other 7  (predict for XP_048630033.1)
other 8  (predict for XP_048630034.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106406033
ath-u.5
for
AT5G66240
gma-u.5
for
100810444
gma-u.5
for
100807825
vvi-u.5
for
100255744
ppo-u.5
for
18099200
mtr-u.5
for
25501403
sly-u.5
for
101258611
osa-u.5
for
4343770
zma-u.5
for
100273578


Ortholog ID: 10422
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi sbi bdi
Symbol LOC106406018 LOC106406033 LOC103855351 AT5G66240 LOC107936580 LOC107909448 LOC102622131 LOC100807825 LOC100810444 LOC100255744 LOC18099200 LOC25501403 LOC101258611 LOC102588521 LOC107800485 LOC107811301 LOC4343770 LOC100273578 LOC123096107 LOC123091105 LOC123447758 LOC8060458 LOC8081603 LOC100832902
Function* protein ANTHESIS POMOTING FACTOR 1-like protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 Transducin/WD40 repeat-like superfamily protein protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 ubiquitin ligase complex subunit 1-like WD repeat-containing protein 82-B protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 Set1 complex component swd2 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1 protein ANTHESIS POMOTING FACTOR 1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03040 Spliceosome 3
mtr03020 RNA polymerase 3
mtr03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa03015 mRNA surveillance pathway 2
osa03022 Basal transcription factors 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03420 Nucleotide excision repair 4
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi04075 Plant hormone signal transduction 2
sbi03420 Nucleotide excision repair 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00640 Propanoate metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106406018 106406033 103855351 836756 107936580 107909448 102622131 100807825 100810444 100255744 18099200 25501403 101258611 102588521 107800485 107811301 4343770 100273578 123096107 123091105 123447758 8060458 8081603 100832902
The preparation time of this page was 0.1 [sec].