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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106408885   DNA-binding protein SMUBP-2-like 
 bna-r.1   106390831   DNA-binding protein SMUBP-2-like 
 bra-r.6   103849186   DNA-binding protein SMUBP-2 
 ath-u.5   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ghi-r.1   107891390   DNA-binding protein SMUBP-2 
 ghi-r.1   107913562   DNA-binding protein SMUBP-2 
 cit-r.1   102630173   uncharacterized LOC102630173 
 gma-u.5   100816409   DNA-binding protein SMUBP-2 
 gma-u.5   100799347   DNA-binding protein SMUBP-2 
 vvi-u.5   100261474   uncharacterized LOC100261474 
 ppo-u.5   7482421   uncharacterized LOC7482421 
 mtr-u.5   25482868   DNA-binding protein SMUBP-2 
 sly-u.5   101246606   DNA polymerase alpha-associated DNA helicase A 
 sot-r.1   102594548   DNA-binding protein SMUBP-2 
 nta-r.1   107804694   DNA polymerase alpha-associated DNA helicase A 
 nta-r.1   107795928   DNA polymerase alpha-associated DNA helicase A-like 
 osa-u.5   4330452   DNA polymerase alpha-associated DNA helicase A 
 osa-u.5   4346450   DNA polymerase alpha-associated DNA helicase A 
 zma-u.5   103632538   DNA-binding protein SMUBP-2 
 tae-r.2   123111508   DNA-binding protein SMUBP-2 
 tae-r.2   123120747   DNA-binding protein SMUBP-2 
 tae-r.2   123128120   DNA-binding protein SMUBP-2 
 hvu-r.1   123395300   DNA-binding protein SMUBP-2-like 
 hvu-r.1   123401617   DNA-binding protein SMUBP-2-like 
 sbi-r.1   8073162   DNA-binding protein SMUBP-2 
 sbi-r.1   8064666   DNA-binding protein SMUBP-2 
 bdi-r.1   100845695   DNA-binding protein SMUBP-2 
 bdi-r.1   100838511   DNA-binding protein SMUBP-2 

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Top 50 coexpressed genes to 106408885 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106408885 (bna-r.1 coexpression data)

CoexMap"106408885"


bnaLOC106408885 | Entrez gene ID : 106408885    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 2 1 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0043139 [list] [network] 5'-3' DNA helicase activity  (7 genes)  IEA  
Protein XP_048633299.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_048633299.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_048633299.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106408885
bna-r.1
for
106390831
bra-r.6
for
103849186
ath-u.5
for
AT5G35970
ghi-r.1
for
107891390
ghi-r.1
for
107913562
cit-r.1
for
102630173
gma-u.5
for
100816409
gma-u.5
for
100799347
vvi-u.5
for
100261474
ppo-u.5
for
7482421
mtr-u.5
for
25482868
sly-u.5
for
101246606
sot-r.1
for
102594548
nta-r.1
for
107804694
nta-r.1
for
107795928
osa-u.5
for
4330452
osa-u.5
for
4346450
zma-u.5
for
103632538
tae-r.2
for
123111508
tae-r.2
for
123120747
tae-r.2
for
123128120
hvu-r.1
for
123395300
hvu-r.1
for
123401617
sbi-r.1
for
8073162
sbi-r.1
for
8064666
bdi-r.1
for
100845695
bdi-r.1
for
100838511


Ortholog ID: 7358
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC106408885 LOC106390831 LOC103849186 AT5G35970 LOC107891390 LOC107913562 LOC102630173 LOC100816409 LOC100799347 LOC100261474 LOC7482421 LOC25482868 LOC101246606 LOC102594548 LOC107804694 LOC107795928 LOC4330452 LOC4346450 LOC103632538 LOC123111508 LOC123128120 LOC123103323 LOC123395300 LOC123401617 LOC8073162 LOC8064666 LOC100845695 LOC100838511
Function* DNA-binding protein SMUBP-2-like DNA-binding protein SMUBP-2-like DNA-binding protein SMUBP-2 P-loop containing nucleoside triphosphate hydrolases superfamily protein DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 uncharacterized LOC102630173 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 uncharacterized LOC100261474 uncharacterized LOC7482421 DNA-binding protein SMUBP-2 DNA polymerase alpha-associated DNA helicase A DNA-binding protein SMUBP-2 DNA polymerase alpha-associated DNA helicase A DNA polymerase alpha-associated DNA helicase A-like DNA polymerase alpha-associated DNA helicase A DNA polymerase alpha-associated DNA helicase A DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA polymerase alpha-associated DNA helicase A DNA-binding protein SMUBP-2-like DNA-binding protein SMUBP-2-like DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 6
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 5
sly04712 Circadian rhythm - plant 2
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 2
tae00053 Ascorbate and aldarate metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00380 Tryptophan metabolism 3
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106408885 106390831 103849186 833589 107891390 107913562 102630173 100816409 100799347 100261474 7482421 25482868 101246606 102594548 107804694 107795928 4330452 4346450 103632538 123111508 123128120 123103323 123395300 123401617 8073162 8064666 100845695 100838511
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