ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106413826	eukaryotic translation initiation factor 3 subunit H
bna-r.1	106420231	eukaryotic translation initiation factor 3 subunit H
bna-r.1	106362127	eukaryotic translation initiation factor 3 subunit H
bna-r.1	106357939	eukaryotic translation initiation factor 3 subunit H
bra-r.6	103868071	eukaryotic translation initiation factor 3 subunit H
bra-r.6	103843266	eukaryotic translation initiation factor 3 subunit H
bra-r.6	103871858	eukaryotic translation initiation factor 3 subunit H
ath-u.5	TIF3H1	translation initiation factor 3 subunit H1
ghi-r.1	107890527	eukaryotic translation initiation factor 3 subunit H
ghi-r.1	107903821	eukaryotic translation initiation factor 3 subunit H
ghi-r.1	121221001	eukaryotic translation initiation factor 3 subunit H
cit-r.1	102615701	eukaryotic translation initiation factor 3 subunit H
gma-u.5	100814297	eukaryotic translation initiation factor 3 subunit H
gma-u.5	100795273	eukaryotic translation initiation factor 3 subunit H-like
vvi-u.5	100248036	eukaryotic translation initiation factor 3 subunit H
ppo-u.5	7466322	eukaryotic translation initiation factor 3 subunit H
ppo-u.5	7481923	eukaryotic translation initiation factor 3 subunit H
mtr-u.5	11438282	eukaryotic translation initiation factor 3 subunit H
sly-u.5	101255380	eukaryotic translation initiation factor 3 subunit H
sly-u.5	101259786	eukaryotic translation initiation factor 3 subunit H
sot-r.1	102604600	eukaryotic translation initiation factor 3 subunit H-like
sot-r.1	102601497	eukaryotic translation initiation factor 3 subunit H
nta-r.1	107828315	eukaryotic translation initiation factor 3 subunit H-like
nta-r.1	107805315	eukaryotic translation initiation factor 3 subunit H
nta-r.1	107789396	eukaryotic translation initiation factor 3 subunit H
osa-u.5	4335611	eukaryotic translation initiation factor 3 subunit H
zma-u.5	100272851	eukaryotic translation initiation factor 3 subunit 3
zma-u.5	100280503	uncharacterized LOC100280503
tae-r.2	123189015	eukaryotic translation initiation factor 3 subunit H
tae-r.2	123053107	eukaryotic translation initiation factor 3 subunit H
tae-r.2	123045272	eukaryotic translation initiation factor 3 subunit H
hvu-r.1	123426494	eukaryotic translation initiation factor 3 subunit H
sbi-r.1	8058666	eukaryotic translation initiation factor 3 subunit H
bdi-r.1	100826610	eukaryotic translation initiation factor 3 subunit H
cre-r.1	CHLRE_16g676314v5	uncharacterized protein

Top 50 coexpressed genes to 106413826 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106413826 (bna-r.1 coexpression data)

CoexMap"106413826"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016282 [list] [network] eukaryotic 43S preinitiation complex	(6 genes)	IEA
GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex	(81 genes)	IEA
GO:0005829 [list] [network] cytosol	(3196 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(16489 genes)	IEA

GO MF

GO:0003743 [list] [network] translation initiation factor activity	(256 genes)	IEA
GO:0008237 [list] [network] metallopeptidase activity	(266 genes)	IEA
GO:0005515 [list] [network] protein binding	(12789 genes)	IEA

Protein

XP_013710022.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 3, nucl 1, mito 1, plas 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1, mito_plas 1

(predict for XP_013710022.1)

Subcellular
localization
TargetP

other 7, scret 3

(predict for XP_013710022.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106413826	bna-r.1 for 106420231	bna-r.1 for 106362127	bna-r.1 for 106357939	bra-r.6 for 103868071	bra-r.6 for 103843266	bra-r.6 for 103871858	ath-u.5 for TIF3H1	ghi-r.1 for 107890527	ghi-r.1 for 107903821	ghi-r.1 for 121221001	cit-r.1 for 102615701	gma-u.5 for 100814297	gma-u.5 for 100795273	vvi-u.5 for 100248036	ppo-u.5 for 7466322	ppo-u.5 for 7481923	mtr-u.5 for 11438282	sly-u.5 for 101255380	sly-u.5 for 101259786	sot-r.1 for 102604600	sot-r.1 for 102601497	nta-r.1 for 107828315	nta-r.1 for 107805315	nta-r.1 for 107789396	osa-u.5 for 4335611	zma-u.5 for 100272851	zma-u.5 for 100280503	tae-r.2 for 123189015	tae-r.2 for 123053107	tae-r.2 for 123045272	hvu-r.1 for 123426494	sbi-r.1 for 8058666	bdi-r.1 for 100826610	cre-r.1 for CHLRE_16g676314v5

Ortholog

Ortholog ID: 5403

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

TIF3H1

Function^*