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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7466322   eukaryotic translation initiation factor 3 subunit H 
 ppo-r.4   7466322   eukaryotic translation initiation factor 3 subunit H 
 ppo-m.4   7466322   eukaryotic translation initiation factor 3 subunit H 
 ppo-u.5   7481923   eukaryotic translation initiation factor 3 subunit H 
 gma-u.5   100795273   eukaryotic translation initiation factor 3 subunit H-like 
 gma-u.5   100814297   eukaryotic translation initiation factor 3 subunit H 
 mtr-u.5   11438282   eukaryotic translation initiation factor 3 subunit H 
 ath-u.5   TIF3H1   translation initiation factor 3 subunit H1 
 vvi-u.5   100248036   eukaryotic translation initiation factor 3 subunit H 
 sly-u.5   101255380   eukaryotic translation initiation factor 3 subunit H 
 sly-u.5   101259786   eukaryotic translation initiation factor 3 subunit H 
 osa-u.5   4335611   eukaryotic translation initiation factor 3 subunit H 
 zma-u.5   100272851   eukaryotic translation initiation factor 3 subunit 3 
 zma-u.5   100280503   uncharacterized LOC100280503 

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Top 50 coexpressed genes to 7466322 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7466322 (ppo-u.5 coexpression data)

CoexMap"7466322"


ppoLOC7466322 | Entrez gene ID : 7466322    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016282 [list] [network] eukaryotic 43S preinitiation complex  (2 genes)  IEA  
GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex  (26 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (90 genes)  IEA  
GO:0008237 [list] [network] metallopeptidase activity  (109 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002320437.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 2,  plas 1  (predict for XP_002320437.4)
Subcellular
localization
TargetP
other 6  (predict for XP_002320437.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7466322

.
ppo-r.4
for
7466322

.
ppo-m.4
for
7466322

.
ppo-u.5
for
7481923

.
gma-u.5
for
100795273

.
gma-u.5
for
100814297

.
mtr-u.5
for
11438282

.
ath-u.5
for
TIF3H1

.
vvi-u.5
for
100248036

.
sly-u.5
for
101255380

.
sly-u.5
for
101259786

.
osa-u.5
for
4335611

.
zma-u.5
for
100272851

.
zma-u.5
for
100280503

.


Ortholog ID: 5403
Species ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol TIF3H1 LOC100795273 LOC100814297 LOC101259786 LOC101255380 LOC4335611 LOC100280503 LOC100272851 LOC103871858 LOC103868071 LOC100248036 LOC7481923 LOC7466322 LOC11438282 LOC123189015 LOC123053107 LOC123426494 LOC107903821 LOC107890527 LOC106413826 LOC106420231 CHLRE_16g676314v5 LOC8058666 LOC102601497 LOC102604600 LOC102615701 LOC100826610 LOC107789396 LOC107828315
Function* translation initiation factor 3 subunit H1 eukaryotic translation initiation factor 3 subunit H-like eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H uncharacterized LOC100280503 eukaryotic translation initiation factor 3 subunit 3 eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H uncharacterized protein eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H-like eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H eukaryotic translation initiation factor 3 subunit H-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03008 Ribosome biogenesis in eukaryotes 2
ath04712 Circadian rhythm - plant 2
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03040 Spliceosome 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03040 Spliceosome 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi03013 Nucleocytoplasmic transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 10
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 5
bna03420 Nucleotide excision repair 5
bna03010 Ribosome 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot04144 Endocytosis 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 2
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta03060 Protein export 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03450 Non-homologous end-joining 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837627 100795273 100814297 101259786 101255380 4335611 100280503 100272851 103871858 103868071 100248036 7481923 7466322 11438282 123189015 123053107 123426494 107903821 107890527 106413826 106420231 5724761 8058666 102601497 102604600 102615701 100826610 107789396 107828315
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