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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106421517   ataxin-3 homolog 
 bna-r.1   106411666   ataxin-3 homolog 
 bna-r.1   106411806   ataxin-3 homolog 
 bra-r.6   103863262   ataxin-3 homolog 
 bra-r.6   103841330   ataxin-3 homolog 
 ath-u.5   AT3G54130   Josephin family protein 
 ghi-r.1   107898125   ataxin-3 homolog 
 ghi-r.1   107905647   ataxin-3 homolog 
 ghi-r.1   107958033   ataxin-3 homolog 
 cit-r.1   102608142   ataxin-3 homolog 
 gma-u.5   100808056   ataxin-3 homolog 
 gma-u.5   100776098   ataxin-3 homolog 
 vvi-u.5   100249311   ataxin-3 homolog 
 ppo-u.5   7468037   ataxin-3 homolog 
 ppo-u.5   7466041   ataxin-3 homolog 
 mtr-u.5   11428042   ataxin-3 homolog 
 sot-r.1   102589779   ataxin-3 homolog 
 nta-r.1   107770203   ataxin-3 homolog 
 nta-r.1   107816411   ataxin-3 homolog 
 osa-u.5   4324808   putative ataxin-3 homolog 
 zma-u.5   100283523   uncharacterized LOC100283523 
 zma-u.5   100273270   Ataxin-3-like protein 
 tae-r.2   123062615   putative ataxin-3 homolog 
 tae-r.2   123071430   putative ataxin-3 homolog 
 hvu-r.1   123444880   putative ataxin-3 homolog 
 hvu-r.1   123445759   ataxin-3 homolog 
 sbi-r.1   8058916   putative ataxin-3 homolog 
 bdi-r.1   100827657   putative ataxin-3 homolog 
 cre-r.1   CHLRE_11g475450v5   uncharacterized protein 

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Top 50 coexpressed genes to 106421517 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106421517 (bna-r.1 coexpression data)

CoexMap"106421517"


bnaLOC106421517 | Entrez gene ID : 106421517    
Species bna bra ath ghi cit gma vvi ppo mtr sot nta osa zma tae hvu sbi bdi cre sly
Paralog 3 2 1 3 1 2 1 2 1 1 2 1 2 2 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04141 [list] [network] Protein processing in endoplasmic reticulum (648 genes)
GO BP
GO:0016579 [list] [network] protein deubiquitination  (243 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (192 genes)  IEA  
Protein XP_013717805.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  nucl_plas 3,  cyto 1  (predict for XP_013717805.1)
Subcellular
localization
TargetP
other 7  (predict for XP_013717805.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106421517
bna-r.1
for
106411666
bna-r.1
for
106411806
bra-r.6
for
103863262
bra-r.6
for
103841330
ath-u.5
for
AT3G54130
ghi-r.1
for
107898125
ghi-r.1
for
107905647
ghi-r.1
for
107958033
cit-r.1
for
102608142
gma-u.5
for
100808056
gma-u.5
for
100776098
vvi-u.5
for
100249311
ppo-u.5
for
7468037
ppo-u.5
for
7466041
mtr-u.5
for
11428042
sot-r.1
for
102589779
nta-r.1
for
107770203
nta-r.1
for
107816411
osa-u.5
for
4324808
zma-u.5
for
100283523
zma-u.5
for
100273270
tae-r.2
for
123062615
tae-r.2
for
123071430
hvu-r.1
for
123444880
hvu-r.1
for
123445759
sbi-r.1
for
8058916
bdi-r.1
for
100827657
cre-r.1
for
CHLRE_11g475450v5


Ortholog ID: 6289
Species bna bna bna bra bra ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC106421517 LOC106411666 LOC106411806 LOC103863262 LOC103841330 AT3G54130 LOC107898125 LOC107905647 LOC107958033 LOC102608142 LOC100808056 LOC100776098 LOC100249311 LOC7468037 LOC7466041 LOC11428042 LOC102589779 LOC107770203 LOC107816411 LOC4324808 LOC100283523 LOC100273270 LOC123062615 LOC123079771 LOC123135528 LOC123444880 LOC123445759 LOC8058916 LOC100827657 CHLRE_11g475450v5
Function* ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog Josephin family protein ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog ataxin-3 homolog putative ataxin-3 homolog uncharacterized LOC100283523 Ataxin-3-like protein putative ataxin-3 homolog putative ataxin-3 homolog ataxin-3 homolog putative ataxin-3 homolog ataxin-3 homolog putative ataxin-3 homolog putative ataxin-3 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna02010 ABC transporters 2
bna04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna02010 ABC transporters 2
bna04981 Folate transport and metabolism 2
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna02010 ABC transporters 2
bna04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 5
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00620 Pyruvate metabolism 4
ghi01200 Carbon metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 8
sot00020 Citrate cycle (TCA cycle) 3
sot01200 Carbon metabolism 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta00040 Pentose and glucuronate interconversions 2
nta00053 Ascorbate and aldarate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 6
nta03013 Nucleocytoplasmic transport 4
nta00040 Pentose and glucuronate interconversions 2
nta00053 Ascorbate and aldarate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae04141 Protein processing in endoplasmic reticulum 4
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03082 ATP-dependent chromatin remodeling 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
tae03018 RNA degradation 3
tae04820 Cytoskeleton in muscle cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 11
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106421517 106411666 106411806 103863262 103841330 824580 107898125 107905647 107958033 102608142 100808056 100776098 100249311 7468037 7466041 11428042 102589779 107770203 107816411 4324808 100283523 100273270 123062615 123079771 123135528 123444880 123445759 8058916 100827657 5727563
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