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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106430626   probable starch synthase 4, chloroplastic/amyloplastic 
 ath-u.5   SS4   starch synthase 4 
 gma-u.5   100804775   probable starch synthase 4, chloroplastic/amyloplastic 
 gma-u.5   100788308   probable starch synthase 4, chloroplastic/amyloplastic 
 vvi-u.5   100257130   probable starch synthase 4, chloroplastic/amyloplastic 
 vvi-u.5   100233071   starch synthase VI 
 ppo-u.5   18107883   uncharacterized LOC18107883 
 ppo-u.5   7487835   probable starch synthase 4, chloroplastic/amyloplastic 
 mtr-u.5   25493390   probable starch synthase 4, chloroplastic/amyloplastic 
 sly-u.5   100191117   starch synthase VI 
 sly-u.5   100316881   starch synthase IV 
 osa-u.5   4339426   probable starch synthase 4, chloroplastic/amyloplastic 
 osa-u.5   4324654   probable starch synthase 4, chloroplastic/amyloplastic 
 zma-u.5   100170236   starch synthase IV 

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Top 50 coexpressed genes to 106430626 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106430626 (bna-r.1 coexpression data)

CoexMap"106430626"


bnaLOC106430626 | Entrez gene ID : 106430626    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 1 2 2 2 1 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00500 [list] [network] Starch and sucrose metabolism (474 genes)
GO BP
GO CC
GO MF
GO:0004373 [list] [network] alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity  (13 genes)  IEA  
Protein XP_022566908.2 [sequence] [blastp]
XP_048622553.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_022566908.2)
chlo 6,  nucl 1,  plas 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_048622553.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_022566908.2)
chlo 6  (predict for XP_048622553.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106430626
ath-u.5
for
SS4
gma-u.5
for
100804775
gma-u.5
for
100788308
vvi-u.5
for
100257130
vvi-u.5
for
100233071
ppo-u.5
for
18107883
ppo-u.5
for
7487835
mtr-u.5
for
25493390
sly-u.5
for
100191117
sly-u.5
for
100316881
osa-u.5
for
4339426
osa-u.5
for
4324654
zma-u.5
for
100170236


Ortholog ID: 6039
Species bna bna bra ath ghi ghi cit cit gma gma vvi vvi ppo ppo mtr sly sly sot nta nta osa osa zma tae tae hvu sbi bdi cre cre
Symbol LOC106360862 LOC106430626 LOC103834053 SS4 LOC107913770 LOC121218677 LOC102626137 LOC102627834 LOC100788308 LOC100804775 LOC100257130 LOC100233071 LOC7487835 LOC18107883 LOC25493390 LOC100191117 LOC100316881 LOC102579881 LOC107766543 LOC107807888 LOC4324654 LOC4339426 LOC100170236 LOC123141968 LOC543061 LOC123448543 LOC8068976 LOC100836636 CHLRE_16g665800v5 CHLRE_16g663850v5
Function* probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase 4 probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic uncharacterized LOC102627834 probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase VI probable starch synthase 4, chloroplastic/amyloplastic uncharacterized LOC18107883 probable starch synthase 4, chloroplastic/amyloplastic starch synthase VI starch synthase IV glycogen synthase-like uncharacterized LOC107766543 putative starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic starch synthase IV probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic probable starch synthase 4, chloroplastic/amyloplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 3
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 3
bna00500 Starch and sucrose metabolism 2
bna00561 Glycerolipid metabolism 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
bra00500 Starch and sucrose metabolism 2
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 7
ath00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 4
ghi03018 RNA degradation 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00500 Starch and sucrose metabolism 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot00561 Glycerolipid metabolism 2
sot00053 Ascorbate and aldarate metabolism 2
sot00562 Inositol phosphate metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00330 Arginine and proline metabolism 2
osa01230 Biosynthesis of amino acids 2
osa00190 Oxidative phosphorylation 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi01200 Carbon metabolism 3
bdi00260 Glycine, serine and threonine metabolism 2
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00010 Glycolysis / Gluconeogenesis 2
cre00030 Pentose phosphate pathway 2
cre00051 Fructose and mannose metabolism 2
cre00710 Carbon fixation by Calvin cycle 2
cre01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106360862 106430626 103834053 827550 107913770 121218677 102626137 102627834 100788308 100804775 100257130 100233071 7487835 18107883 25493390 100191117 100316881 102579881 107766543 107807888 4324654 4339426 100170236 123141968 543061 123448543 8068976 100836636 5727013 5727030
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