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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106430649   cyclin-L1-1-like 
 bna-r.1   106430650   cyclin-L1-1-like 
 bna-r.1   106358071   cyclin-L1-1 
 bra-r.6   103829119   cyclin-L1-1 
 ath-u.5   RCY1   arginine-rich cyclin 1 
 ghi-r.1   107930652   cyclin-L1-1 
 ghi-r.1   107922601   cyclin-L1-1 
 cit-r.1   102614657   cyclin-L1-1 
 gma-u.5   100820383   cyclin-L1-1-like 
 gma-u.5   100815690   cyclin-L1-1 
 vvi-u.5   104878662   cyclin-L1-1-like 
 vvi-u.5   100241975   cyclin-L1-1 
 vvi-u.5   104880255   uncharacterized LOC104880255 
 ppo-u.5   7457885   cyclin-L1-1 
 mtr-u.5   11430123   cyclin-L1-1 
 mtr-u.5   11420517   cyclin-L1-1 
 sly-u.5   101252821   cyclin-L1-1 
 sot-r.1   102586704   cyclin-L1-1 
 nta-r.1   107766887   cyclin-L1-1 
 nta-r.1   107785812   cyclin-L1-1 
 osa-u.5   4325450   cyclin-L1-1-like 
 zma-u.5   100382239   uncharacterized LOC100382239 
 zma-u.5   100283163   uncharacterized LOC100283163 
 tae-r.2   543040   uncharacterized LOC543040 
 hvu-r.1   123401952   cyclin-L1-1 
 sbi-r.1   110434873   cyclin-L1-1 
 bdi-r.1   100830239   cyclin-L1-1 
 cre-r.1   CHLRE_07g321650v5   uncharacterized protein 

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Top 50 coexpressed genes to 106430649 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106430649 (bna-r.1 coexpression data)

CoexMap"106430649"


bnaLOC106430649 | Entrez gene ID : 106430649    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 2 1 2 3 1 2 1 1 2 1 2 1 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0016538 [list] [network] cyclin-dependent protein serine/threonine kinase regulator activity  (183 genes)  IEA  
Protein XP_013726881.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  cysk 1  (predict for XP_013726881.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013726881.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106430649
bna-r.1
for
106430650
bna-r.1
for
106358071
bra-r.6
for
103829119
ath-u.5
for
RCY1
ghi-r.1
for
107930652
ghi-r.1
for
107922601
cit-r.1
for
102614657
gma-u.5
for
100820383
gma-u.5
for
100815690
vvi-u.5
for
104878662
vvi-u.5
for
100241975
vvi-u.5
for
104880255
ppo-u.5
for
7457885
mtr-u.5
for
11430123
mtr-u.5
for
11420517
sly-u.5
for
101252821
sot-r.1
for
102586704
nta-r.1
for
107766887
nta-r.1
for
107785812
osa-u.5
for
4325450
zma-u.5
for
100382239
zma-u.5
for
100283163
tae-r.2
for
543040
hvu-r.1
for
123401952
sbi-r.1
for
110434873
bdi-r.1
for
100830239
cre-r.1
for
CHLRE_07g321650v5


Ortholog ID: 7927
Species bna bna bna bra ath ghi ghi cit gma gma vvi vvi vvi ppo mtr mtr sly sot nta nta osa zma zma tae hvu sbi bdi cre
Symbol LOC106430649 LOC106430650 LOC106358071 LOC103829119 RCY1 LOC107930652 LOC107922601 LOC102614657 LOC100820383 LOC100815690 LOC104878662 LOC100241975 LOC104880255 LOC7457885 LOC11430123 LOC11420517 LOC101252821 LOC102586704 LOC107766887 LOC107785812 LOC4325450 LOC100382239 LOC100283163 LOC543040 LOC123401952 LOC110434873 LOC100830239 CHLRE_07g321650v5
Function* cyclin-L1-1-like cyclin-L1-1-like cyclin-L1-1 cyclin-L1-1 arginine-rich cyclin 1 cyclin-L1-1 cyclin-L1-1 cyclin-L1-1 cyclin-L1-1-like cyclin-L1-1 cyclin-L1-1-like cyclin-L1-1 uncharacterized LOC104880255 cyclin-L1-1 cyclin-L1-1 cyclin-L1-1 cyclin-L1-1 cyclin-L1-1 cyclin-L1-1 cyclin-L1-1 cyclin-L1-1-like uncharacterized LOC100382239 uncharacterized LOC100283163 uncharacterized LOC543040 cyclin-L1-1 cyclin-L1-1 cyclin-L1-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03250 Viral life cycle - HIV-1 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 8
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta03250 Viral life cycle - HIV-1 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 4
bdi03060 Protein export 2
bdi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106430649 106430650 106358071 103829119 817183 107930652 107922601 102614657 100820383 100815690 104878662 100241975 104880255 7457885 11430123 11420517 101252821 102586704 107766887 107785812 4325450 100382239 100283163 543040 123401952 110434873 100830239 5726593
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