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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106436856   KH domain-containing protein At4g18375 
 ath-u.5   AT4G18375   RNA-binding KH domain-containing protein 
 ath-u.5   AT5G46190   RNA-binding KH domain-containing protein 
 gma-u.5   100801062   KH domain-containing protein At4g18375 
 vvi-u.5   100261680   KH domain-containing protein At4g18375 
 ppo-u.5   7495314   KH domain-containing protein At4g18375 
 ppo-u.5   7490830   KH domain-containing protein At4g18375 
 mtr-u.5   120577447   KH domain-containing protein At4g18375 
 mtr-u.5   11439323   KH domain-containing protein At4g18375 
 sly-u.5   101248503   KH domain-containing protein At4g18375 
 osa-u.5   4344900   KH domain-containing protein At4g18375 
 zma-u.5   109946006   KH domain-containing protein At4g18375 
 zma-u.5   100384498   RNA-binding KH domain-containing protein 
 zma-u.5   103645654   KH domain-containing protein At4g18375-like 

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Top 50 coexpressed genes to 106436856 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106436856 (bna-r.1 coexpression data)

CoexMap"106436856"


bnaLOC106436856 | Entrez gene ID : 106436856    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 2 1 1 2 2 1 1 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (6396 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_013733257.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  nucl 3,  chlo_mito 3,  chlo 1,  cyto 1,  cysk_nucl 1  (predict for XP_013733257.2)
Subcellular
localization
TargetP
other 7  (predict for XP_013733257.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106436856
ath-u.5
for
AT4G18375
ath-u.5
for
AT5G46190
gma-u.5
for
100801062
vvi-u.5
for
100261680
ppo-u.5
for
7495314
ppo-u.5
for
7490830
mtr-u.5
for
120577447
mtr-u.5
for
11439323
sly-u.5
for
101248503
osa-u.5
for
4344900
zma-u.5
for
109946006
zma-u.5
for
100384498
zma-u.5
for
103645654


Ortholog ID: 6040
Species bna bna bra bra ath ath ghi ghi cit gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae hvu hvu sbi bdi
Symbol LOC106401685 LOC106357469 LOC103827748 LOC103856291 AT5G46190 AT4G18375 LOC107891745 LOC107889039 LOC102616634 LOC100801062 LOC100261680 LOC7490830 LOC7495314 LOC120577447 LOC11439323 LOC101248503 LOC102583330 LOC107819928 LOC107814867 LOC4344900 LOC109946006 LOC103645654 LOC123063579 LOC123114325 LOC123395111 LOC123445624 LOC8085026 LOC100827182
Function* KH domain-containing protein At4g18375 KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375 KH domain-containing protein At4g18375 KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375-like KH domain-containing protein At4g18375 KH domain-containing protein At4g18375
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04120 Ubiquitin mediated proteolysis 3
bna04712 Circadian rhythm - plant 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 6
bna00513 Various types of N-glycan biosynthesis 4
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra04145 Phagosome 3
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit03015 mRNA surveillance pathway 3
cit03250 Viral life cycle - HIV-1 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106401685 106357469 103827748 103856291 834661 827566 107891745 107889039 102616634 100801062 100261680 7490830 7495314 120577447 11439323 101248503 102583330 107819928 107814867 4344900 109946006 103645654 123063579 123114325 123395111 123445624 8085026 100827182
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