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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106451116  growth-regulating factor 3 
 bna-r.1  125609293  growth-regulating factor 3-like 
 bna-r.1  125608315  growth-regulating factor 3-like 
 bra-r.6  103867286  growth-regulating factor 3 
 bra-r.6  103865541  growth-regulating factor 3 
 ath-u.5  GRF3  growth-regulating factor 3 
 ath-u.5  GRF4  growth-regulating factor 4 
 ghi-r.1  107948122  growth-regulating factor 3-like 
 ghi-r.1  107889558  growth-regulating factor 3 
 ghi-r.1  107908708  growth-regulating factor 3 
 cit-r.1  102615240  growth-regulating factor 3 
 gma-u.5  GRF12  growth-regulating factor 
 gma-u.5  GRF9  growth-regulating factor 
 gma-u.5  GRF20  growth-regulating factor 
 vvi-u.5  100249368  growth-regulating factor 3 
 ppo-u.5  18100062  growth-regulating factor 4 
 mtr-u.5  11429911  growth-regulating factor 3 
 sly-u.5  101268132  growth-regulating factor 3-like 
 sly-u.5  101261864  growth-regulating factor 3 
 sot-r.1  102584006  growth-regulating factor 3-like 
 sot-r.1  102596708  growth-regulating factor 3-like 
 sot-r.1  107059479  growth-regulating factor 3-like 
 nta-r.1  107813130  growth-regulating factor 3 
 nta-r.1  107799814  growth-regulating factor 3-like 

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Top 50 coexpressed genes to 106451116 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106451116 (bna-r.1 coexpression data)

CoexMap"106451116"


bnaLOC106451116 | Entrez gene ID : 106451116
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 3 2 2 3 1 3 1 1 1 2 3 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (740 genes)  IEA  
GO:0032502 [list] [network] developmental process  (1071 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013748432.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013748432.2)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_013748432.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106451116


bna-r.1
for
125609293


bna-r.1
for
125608315


bra-r.6
for
103867286


bra-r.6
for
103865541


ath-u.5
for
GRF3


ath-u.5
for
GRF4


ghi-r.1
for
107948122


ghi-r.1
for
107889558


ghi-r.1
for
107908708


cit-r.1
for
102615240


gma-u.5
for
GRF12


gma-u.5
for
GRF9


gma-u.5
for
GRF20


vvi-u.5
for
100249368


ppo-u.5
for
18100062


mtr-u.5
for
11429911


sly-u.5
for
101268132


sly-u.5
for
101261864


sot-r.1
for
102584006


sot-r.1
for
102596708


sot-r.1
for
107059479


nta-r.1
for
107813130


nta-r.1
for
107799814



Ortholog ID: 4531
Species bna bna bra ath ath ghi ghi ghi cit gma gma gma vvi ppo mtr sly sly sot sot sot nta nta nta
Symbol LOC125609293 LOC106367805 LOC103867286 GRF3 GRF4 LOC107948122 LOC107889558 LOC107908708 LOC102615240 GRF12 GRF9 GRF3 LOC100249368 LOC18100062 LOC11429911 LOC101268132 LOC101261864 LOC102584006 LOC102596708 LOC107059479 LOC107813130 LOC107799814 LOC107770693
Function* growth-regulating factor 3-like growth-regulating factor 4 growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor growth-regulating factor growth-regulating factor 3 growth-regulating factor 3 growth-regulating factor 4 growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3-like growth-regulating factor 3 growth-regulating factor 3-like growth-regulating factor 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125609293 106367805 103867286 818213 824457 107948122 107889558 107908708 102615240 100817197 100814300 100816436 100249368 18100062 11429911 101268132 101261864 102584006 102596708 107059479 107813130 107799814 107770693
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