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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106452553   DNA-directed RNA polymerases I and III subunit RPAC1 
 ath-u.5   RPAC43   RNA polymerase I subunit 43 
 ath-u.5   ATRPAC42   DNA-directed RNA polymerase family protein 
 gma-u.5   100818494   DNA-directed RNA polymerases I and III subunit RPAC1 
 gma-u.5   100786622   DNA-directed RNA polymerases I and III subunit RPAC1-like 
 vvi-u.5   100248046   uncharacterized LOC100248046 
 ppo-u.5   7485118   uncharacterized LOC7485118 
 mtr-u.5   11444317   DNA-directed RNA polymerases I and III subunit RPAC1 
 sly-u.5   101248458   uncharacterized LOC101248458 
 osa-u.5   4332531   uncharacterized LOC4332531 
 zma-u.5   100191943   uncharacterized LOC100191943 

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Top 50 coexpressed genes to 106452553 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106452553 (bna-r.1 coexpression data)

CoexMap"106452553"


bnaLOC106452553 | Entrez gene ID : 106452553    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03020 [list] [network] RNA polymerase (161 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (740 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (52 genes)  IEA  
GO:0005666 [list] [network] RNA polymerase III complex  (74 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1531 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_013750161.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_013750161.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013750161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106452553
ath-u.5
for
RPAC43
ath-u.5
for
ATRPAC42
gma-u.5
for
100818494
gma-u.5
for
100786622
vvi-u.5
for
100248046
ppo-u.5
for
7485118
mtr-u.5
for
11444317
sly-u.5
for
101248458
osa-u.5
for
4332531
zma-u.5
for
100191943


Ortholog ID: 6738
Species bna bna bra ath ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC125579279 LOC106452553 LOC103829922 RPAC43 ATRPAC42 LOC107888162 LOC107920955 LOC102620633 LOC100818494 LOC100786622 LOC100248046 LOC7485118 LOC11444317 LOC101248458 LOC102598359 LOC107775895 LOC107787692 LOC4332531 LOC100191943 LOC123181834 LOC123053408 LOC123440058 LOC8071624 LOC100828268 CHLRE_07g313302v5
Function* DNA-directed RNA polymerases I and III subunit rpac1-like DNA-directed RNA polymerases I and III subunit RPAC1 DNA-directed RNA polymerases I and III subunit rpac1 RNA polymerase I subunit 43 DNA-directed RNA polymerase family protein DNA-directed RNA polymerases I and III subunit RPAC1 DNA-directed RNA polymerases I and III subunit RPAC1 uncharacterized LOC102620633 DNA-directed RNA polymerases I and III subunit RPAC1 DNA-directed RNA polymerases I and III subunit RPAC1-like uncharacterized LOC100248046 uncharacterized LOC7485118 DNA-directed RNA polymerases I and III subunit RPAC1 uncharacterized LOC101248458 DNA-directed RNA polymerases I and III subunit RPAC1 uncharacterized LOC107775895 uncharacterized LOC107787692 uncharacterized LOC4332531 uncharacterized LOC100191943 DNA-directed RNA polymerases I and III subunit rpac1 DNA-directed RNA polymerases I and III subunit rpac1 DNA-directed RNA polymerases I and III subunit rpac1 DNA-directed RNA polymerases I and III subunit rpac1 DNA-directed RNA polymerases I and III subunit rpac1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03008 Ribosome biogenesis in eukaryotes 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 4
ath03018 RNA degradation 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03020 RNA polymerase 2
nta00040 Pentose and glucuronate interconversions 2
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03020 RNA polymerase 2
nta00040 Pentose and glucuronate interconversions 2
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03020 RNA polymerase 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125579279 106452553 103829922 842356 842377 107888162 107920955 102620633 100818494 100786622 100248046 7485118 11444317 101248458 102598359 107775895 107787692 4332531 100191943 123181834 123053408 123440058 8071624 100828268 66053942
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