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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  125579279  DNA-directed RNA polymerases I and III subunit rpac1-like 
 bna-r.1  106452553  DNA-directed RNA polymerases I and III subunit RPAC1 
 bna-r.1  106366576  DNA-directed RNA polymerases I and III subunit RPAC1 
 bna-r.1  106449894  DNA-directed RNA polymerases I and III subunit rpac1-like 
 bra-r.6  103829922  DNA-directed RNA polymerases I and III subunit rpac1 
 ath-u.5  RPAC43  RNA polymerase I subunit 43 
 ath-u.5  ATRPAC42  DNA-directed RNA polymerase family protein 
 ghi-r.1  107920955  DNA-directed RNA polymerases I and III subunit RPAC1 
 ghi-r.1  107931573  DNA-directed RNA polymerases I and III subunit rpac1 
 cit-r.1  102620633  uncharacterized LOC102620633 
 gma-u.5  100818494  DNA-directed RNA polymerases I and III subunit RPAC1 
 gma-u.5  100786622  DNA-directed RNA polymerases I and III subunit RPAC1-like 
 vvi-u.5  100248046  uncharacterized LOC100248046 
 ppo-u.5  7485118  uncharacterized LOC7485118 
 mtr-u.5  11444317  DNA-directed RNA polymerases I and III subunit RPAC1 
 sly-u.5  101248458  uncharacterized LOC101248458 
 sot-r.1  102598359  DNA-directed RNA polymerases I and III subunit RPAC1 
 nta-r.1  107775895  uncharacterized LOC107775895 
 nta-r.1  107787692  uncharacterized LOC107787692 
 osa-u.5  4332531  uncharacterized LOC4332531 
 zma-u.5  100191943  uncharacterized LOC100191943 
 tae-r.2  123181834  DNA-directed RNA polymerases I and III subunit rpac1 
 tae-r.2  123130481  DNA-directed RNA polymerases I and III subunit rpac1 
 tae-r.2  123053408  DNA-directed RNA polymerases I and III subunit rpac1 
 hvu-r.1  123440058  DNA-directed RNA polymerases I and III subunit rpac1 
 sbi-r.1  8071624  DNA-directed RNA polymerases I and III subunit rpac1 
 bdi-r.1  100828268  DNA-directed RNA polymerases I and III subunit rpac1 
 cre-r.1  CHLRE_07g313302v5  uncharacterized protein 

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Top 50 coexpressed genes to 125579279 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125579279 (bna-r.1 coexpression data)

CoexMap"125579279"


bnaLOC125579279 | Entrez gene ID : 125579279
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03020 [list] [network] RNA polymerase (161 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (740 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (52 genes)  IEA  
GO:0005666 [list] [network] RNA polymerase III complex  (74 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1531 genes)  IEA  
Protein XP_048599221.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cysk 2,  cysk_nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_048599221.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048599221.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
125579279


bna-r.1
for
106452553


bna-r.1
for
106366576


bna-r.1
for
106449894


bra-r.6
for
103829922


ath-u.5
for
RPAC43


ath-u.5
for
ATRPAC42


ghi-r.1
for
107920955


ghi-r.1
for
107931573


cit-r.1
for
102620633


gma-u.5
for
100818494


gma-u.5
for
100786622


vvi-u.5
for
100248046


ppo-u.5
for
7485118


mtr-u.5
for
11444317


sly-u.5
for
101248458


sot-r.1
for
102598359


nta-r.1
for
107775895


nta-r.1
for
107787692


osa-u.5
for
4332531


zma-u.5
for
100191943


tae-r.2
for
123181834


tae-r.2
for
123130481


tae-r.2
for
123053408


hvu-r.1
for
123440058


sbi-r.1
for
8071624


bdi-r.1
for
100828268


cre-r.1
for
CHLRE_07g313302v5



Ortholog ID: 6738
Species bna bna bna bra ath ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC125579279 LOC106452553 LOC106366576 LOC103829922 RPAC43 ATRPAC42 LOC107920955 LOC107888162 LOC102620633 LOC100818494 LOC100786622 LOC100248046 LOC7485118 LOC11444317 LOC101248458 LOC102598359 LOC107775895 LOC107787692 LOC4332531 LOC100191943 LOC123181834 LOC123130481 LOC123053408 LOC123440058 LOC8071624 LOC100828268 CHLRE_07g313302v5
Function* DNA-directed RNA polymerases I and III subunit rpac1-like DNA-directed RNA polymerases I and III subunit RPAC1 DNA-directed RNA polymerases I and III subunit RPAC1 DNA-directed RNA polymerases I and III subunit rpac1 RNA polymerase I subunit 43 DNA-directed RNA polymerase family protein DNA-directed RNA polymerases I and III subunit RPAC1 DNA-directed RNA polymerases I and III subunit RPAC1 uncharacterized LOC102620633 DNA-directed RNA polymerases I and III subunit RPAC1 DNA-directed RNA polymerases I and III subunit RPAC1-like uncharacterized LOC100248046 uncharacterized LOC7485118 DNA-directed RNA polymerases I and III subunit RPAC1 uncharacterized LOC101248458 DNA-directed RNA polymerases I and III subunit RPAC1 uncharacterized LOC107775895 uncharacterized LOC107787692 uncharacterized LOC4332531 uncharacterized LOC100191943 DNA-directed RNA polymerases I and III subunit rpac1 DNA-directed RNA polymerases I and III subunit rpac1 DNA-directed RNA polymerases I and III subunit rpac1 DNA-directed RNA polymerases I and III subunit rpac1 DNA-directed RNA polymerases I and III subunit rpac1 DNA-directed RNA polymerases I and III subunit rpac1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03008 Ribosome biogenesis in eukaryotes 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 4
ath03018 RNA degradation 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03020 RNA polymerase 2
nta00040 Pentose and glucuronate interconversions 2
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03020 RNA polymerase 2
nta00040 Pentose and glucuronate interconversions 2
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03020 RNA polymerase 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03020 RNA polymerase 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 4
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125579279 106452553 106366576 103829922 842356 842377 107920955 107888162 102620633 100818494 100786622 100248046 7485118 11444317 101248458 102598359 107775895 107787692 4332531 100191943 123181834 123130481 123053408 123440058 8071624 100828268 66053942
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