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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107760041  large ribosomal subunit protein uL6c-like 
 nta-r.1  107803875  large ribosomal subunit protein uL6c 
 sly-u.5  101248086  50S ribosomal protein L6, chloroplastic 
 sot-r.1  102601925  50S ribosomal protein L6, chloroplastic 
 ath-u.5  emb2394  Ribosomal protein L6 family 
 gma-u.5  100779839  50S ribosomal protein L6, chloroplastic 
 gma-u.5  100801236  50S ribosomal protein L6, chloroplastic 
 bra-r.6  103844162  50S ribosomal protein L6, chloroplastic 
 bra-r.6  103843623  50S ribosomal protein L6, chloroplastic 
 vvi-u.5  100263647  large ribosomal subunit protein uL6c 
 ppo-u.5  7462053  50S ribosomal protein L6, chloroplastic 
 ppo-u.5  18103738  50S ribosomal protein L6, chloroplastic-like 
 mtr-u.5  25480870  50S ribosomal protein L6, chloroplastic 
 ghi-r.1  107918484  50S ribosomal protein L6, chloroplastic 
 ghi-r.1  107895045  50S ribosomal protein L6, chloroplastic 
 bna-r.1  106420053  50S ribosomal protein L6, chloroplastic-like 
 cit-r.1  102611043  50S ribosomal protein L6, chloroplastic 
 osa-u.5  4332868  large ribosomal subunit protein uL6c 
 osa-u.5  4334131  large ribosomal subunit protein uL6c 
 zma-u.5  100282171  50S ribosomal protein L6, chloroplastic-like 
 zma-u.5  100285964  50S ribosomal protein L6, chloroplastic-like 
 tae-r.2  123104269  50S ribosomal protein L6, chloroplastic 
 tae-r.2  123097432  50S ribosomal protein L6, chloroplastic 
 tae-r.2  123092021  50S ribosomal protein L6, chloroplastic 
 hvu-r.1  123448551  50S ribosomal protein L6, chloroplastic 
 sbi-r.1  8080817  50S ribosomal protein L6, chloroplastic 
 bdi-r.1  100831674  50S ribosomal protein L6, chloroplastic 
 cre-r.1  CHLRE_09g415950v5  uncharacterized protein 

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Top 50 coexpressed genes to 107760041 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107760041 (nta-r.1 coexpression data)

CoexMap"107760041"


ntaLOC107760041 | Entrez gene ID : 107760041
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 2 2 1 2 1 2 1 1 2 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03010 [list] [network] Ribosome (765 genes)
GO BP
GO:0006412 [list] [network] translation  (1013 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (734 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (147 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (725 genes)  IEA  
Protein XP_016433553.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1  (predict for XP_016433553.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_016433553.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107760041


nta-r.1
for
107803875


sly-u.5
for
101248086


sot-r.1
for
102601925


ath-u.5
for
emb2394


gma-u.5
for
100779839


gma-u.5
for
100801236


bra-r.6
for
103844162


bra-r.6
for
103843623


vvi-u.5
for
100263647


ppo-u.5
for
7462053


ppo-u.5
for
18103738


mtr-u.5
for
25480870


ghi-r.1
for
107918484


ghi-r.1
for
107895045


bna-r.1
for
106420053


cit-r.1
for
102611043


osa-u.5
for
4332868


osa-u.5
for
4334131


zma-u.5
for
100282171


zma-u.5
for
100285964


tae-r.2
for
123104269


tae-r.2
for
123097432


tae-r.2
for
123092021


hvu-r.1
for
123448551


sbi-r.1
for
8080817


bdi-r.1
for
100831674


cre-r.1
for
CHLRE_09g415950v5



Ortholog ID: 6143
Species nta nta sly sot ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107760041 LOC107803875 LOC101248086 LOC102601925 emb2394 LOC100779839 LOC100801236 LOC103844162 LOC103843623 LOC100263647 LOC7462053 LOC18103738 LOC25480870 LOC107918484 LOC107895045 LOC106420053 LOC106401552 LOC106371081 LOC102611043 LOC4332868 LOC4334131 LOC100282171 LOC100285964 LOC123104269 LOC123097432 LOC123092021 LOC123448551 LOC8080817 LOC100831674 CHLRE_09g415950v5
Function* large ribosomal subunit protein uL6c-like large ribosomal subunit protein uL6c 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic Ribosomal protein L6 family 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic large ribosomal subunit protein uL6c 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic-like 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic-like 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic-like 50S ribosomal protein L6, chloroplastic large ribosomal subunit protein uL6c large ribosomal subunit protein uL6c 50S ribosomal protein L6, chloroplastic-like 50S ribosomal protein L6, chloroplastic-like 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107760041 107803875 101248086 102601925 839273 100779839 100801236 103844162 103843623 100263647 7462053 18103738 25480870 107918484 107895045 106420053 106401552 106371081 102611043 4332868 4334131 100282171 100285964 123104269 123097432 123092021 123448551 8080817 100831674 5722374
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