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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7462053   50S ribosomal protein L6, chloroplastic 
 ppo-r.4   7462053   50S ribosomal protein L6, chloroplastic 
 ppo-m.4   7462053   50S ribosomal protein L6, chloroplastic 
 ppo-u.5   18103738   50S ribosomal protein L6, chloroplastic-like 
 gma-u.5   100801236   50S ribosomal protein L6, chloroplastic 
 gma-u.5   100779839   50S ribosomal protein L6, chloroplastic 
 mtr-u.5   25480870   50S ribosomal protein L6, chloroplastic 
 ath-u.5   emb2394   Ribosomal protein L6 family 
 vvi-u.5   100263647   large ribosomal subunit protein uL6c 
 sly-u.5   101248086   50S ribosomal protein L6, chloroplastic 
 osa-u.5   4334131   large ribosomal subunit protein uL6c 
 osa-u.5   4332868   large ribosomal subunit protein uL6c 
 zma-u.5   100282171   50S ribosomal protein L6, chloroplastic-like 
 zma-u.5   100285964   50S ribosomal protein L6, chloroplastic-like 

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Top 50 coexpressed genes to 7462053 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7462053 (ppo-u.5 coexpression data)

CoexMap"7462053"


ppoLOC7462053 | Entrez gene ID : 7462053    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (93 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002320459.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_002320459.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002320459.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7462053

.
ppo-r.4
for
7462053

.
ppo-m.4
for
7462053

.
ppo-u.5
for
18103738

.
gma-u.5
for
100801236

.
gma-u.5
for
100779839

.
mtr-u.5
for
25480870

.
ath-u.5
for
emb2394

.
vvi-u.5
for
100263647

.
sly-u.5
for
101248086

.
osa-u.5
for
4334131

.
osa-u.5
for
4332868

.
zma-u.5
for
100282171

.
zma-u.5
for
100285964

.


Ortholog ID: 6143
Species ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol emb2394 LOC100779839 LOC100801236 LOC101248086 LOC4334131 LOC4332868 LOC100285964 LOC100282171 LOC103843623 LOC100263647 LOC7462053 LOC18103738 LOC25480870 LOC123104269 LOC123092021 LOC123448551 LOC107895045 LOC107918484 LOC106371081 LOC106401552 CHLRE_09g415950v5 LOC8080817 LOC102601925 LOC102611043 LOC100831674 LOC107760041 LOC107803875
Function* Ribosomal protein L6 family 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic large ribosomal subunit protein uL6c large ribosomal subunit protein uL6c 50S ribosomal protein L6, chloroplastic-like 50S ribosomal protein L6, chloroplastic-like 50S ribosomal protein L6, chloroplastic large ribosomal subunit protein uL6c 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic-like 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic-like 50S ribosomal protein L6, chloroplastic uncharacterized protein 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic 50S ribosomal protein L6, chloroplastic large ribosomal subunit protein uL6c-like large ribosomal subunit protein uL6c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839273 100779839 100801236 101248086 4334131 4332868 100285964 100282171 103843623 100263647 7462053 18103738 25480870 123104269 123092021 123448551 107895045 107918484 106371081 106401552 5722374 8080817 102601925 102611043 100831674 107760041 107803875
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