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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107765449   pentatricopeptide repeat-containing protein At4g33990 
 nta-r.1   107810545   pentatricopeptide repeat-containing protein At4g33990-like 
 sly-u.5   101249519   pentatricopeptide repeat-containing protein At4g33990 
 sot-r.1   102586450   pentatricopeptide repeat-containing protein At4g33990 
 ath-u.5   EMB2758   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100802551   pentatricopeptide repeat-containing protein At4g33990 
 bra-r.6   103851424   pentatricopeptide repeat-containing protein At4g33990 
 vvi-u.5   100254664   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 vvi-u.5   100254933   pentatricopeptide repeat-containing protein At4g33990 
 vvi-u.5   100854677   pentatricopeptide repeat-containing protein At4g33990 
 ppo-u.5   7480423   pentatricopeptide repeat-containing protein At4g33990 
 mtr-u.5   11427801   pentatricopeptide repeat-containing protein At4g33990 
 ghi-r.1   107935039   pentatricopeptide repeat-containing protein At4g33990 
 ghi-r.1   107908902   pentatricopeptide repeat-containing protein At4g33990 
 bna-r.1   125575576   pentatricopeptide repeat-containing protein At4g33990-like 
 bna-r.1   106427283   pentatricopeptide repeat-containing protein At4g33990-like 
 cit-r.1   102617894   pentatricopeptide repeat-containing protein At4g33990 
 tae-r.2   123168109   pentatricopeptide repeat-containing protein At4g33990 
 hvu-r.1   123408834   pentatricopeptide repeat-containing protein At4g33990 
 bdi-r.1   100820836   pentatricopeptide repeat-containing protein At4g33990 

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Top 50 coexpressed genes to 107765449 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107765449 (nta-r.1 coexpression data)

CoexMap"107765449"


ntaLOC107765449 | Entrez gene ID : 107765449      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit tae hvu bdi zma osa cre sbi
Paralog 2 1 1 1 1 1 3 1 1 2 2 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075081291.1 [sequence] [blastp]
XP_075081292.1 [sequence] [blastp]
XP_075081293.1 [sequence] [blastp]
XP_075081294.1 [sequence] [blastp]
XP_075081295.1 [sequence] [blastp]
XP_075081296.1 [sequence] [blastp]
XP_075081297.1 [sequence] [blastp]
XP_075081298.1 [sequence] [blastp]
XP_075081299.1 [sequence] [blastp]
XP_075081300.1 [sequence] [blastp]
XP_075081301.1 [sequence] [blastp]
XP_075081302.1 [sequence] [blastp]
XP_075081303.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081291.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081292.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081293.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081294.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081295.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081296.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081297.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081298.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081299.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081300.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081301.1)
cyto 4,  chlo 4,  nucl 1  (predict for XP_075081302.1)
chlo 10  (predict for XP_075081303.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_075081291.1)
mito 5  (predict for XP_075081292.1)
mito 5  (predict for XP_075081293.1)
mito 5  (predict for XP_075081294.1)
mito 5  (predict for XP_075081295.1)
mito 5  (predict for XP_075081296.1)
mito 5  (predict for XP_075081297.1)
mito 5  (predict for XP_075081298.1)
mito 5  (predict for XP_075081299.1)
mito 5  (predict for XP_075081300.1)
mito 5  (predict for XP_075081301.1)
mito 5  (predict for XP_075081302.1)
mito 8  (predict for XP_075081303.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107765449
nta-r.1
for
107810545
sly-u.5
for
101249519
sot-r.1
for
102586450
ath-u.5
for
EMB2758
gma-u.5
for
100802551
bra-r.6
for
103851424
vvi-u.5
for
100254664
vvi-u.5
for
100254933
vvi-u.5
for
100854677
ppo-u.5
for
7480423
mtr-u.5
for
11427801
ghi-r.1
for
107935039
ghi-r.1
for
107908902
bna-r.1
for
125575576
bna-r.1
for
106427283
cit-r.1
for
102617894
tae-r.2
for
123168109
hvu-r.1
for
123408834
bdi-r.1
for
100820836


Ortholog ID: 11384
Species nta nta sly sot ath gma bra vvi vvi vvi ppo mtr ghi ghi bna bna cit tae hvu bdi
Symbol LOC107765449 LOC107810545 LOC101249519 LOC102586450 EMB2758 LOC100802551 LOC103851424 LOC100254664 LOC100254933 LOC100854677 LOC7480423 LOC11427801 LOC107935039 LOC107908902 LOC125575576 LOC106427283 LOC102617894 LOC123168109 LOC123408834 LOC100820836
Function* pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990-like pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990-like pentatricopeptide repeat-containing protein At4g33990-like pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990 pentatricopeptide repeat-containing protein At4g33990
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107765449 107810545 101249519 102586450 829546 100802551 103851424 100254664 100254933 100854677 7480423 11427801 107935039 107908902 125575576 106427283 102617894 123168109 123408834 100820836
The preparation time of this page was 1.2 [sec].