ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107773829	vacuolar protein sorting-associated protein 2 homolog 3-like
nta-r.1	107794710	vacuolar protein sorting-associated protein 2 homolog 3
nta-r.1	107784069	vacuolar protein sorting-associated protein 2 homolog 2-like
nta-r.1	107797121	vacuolar protein sorting-associated protein 2 homolog 2
sly-u.5	104645908	vacuolar protein sorting-associated protein 2 homolog 2
sly-u.5	101266227	vacuolar protein sorting-associated protein 2 homolog 3
sot-r.1	102579000	vacuolar protein sorting-associated protein 2 homolog 2
sot-r.1	102582862	vacuolar protein sorting-associated protein 2 homolog 3-like
sot-r.1	102591990	vacuolar protein sorting-associated protein 2 homolog 3-like
ath-u.5	VPS2.2	SNF7 family protein
ath-u.5	VPS2.3	vacuolar protein sorting-associated protein 2.3
gma-u.5	100793101	vacuolar protein sorting-associated protein 2 homolog 2
gma-u.5	100777179	vacuolar protein sorting-associated protein 2 homolog 2
gma-u.5	100306343	uncharacterized LOC100306343
bra-r.6	103834159	vacuolar protein sorting-associated protein 2 homolog 2
bra-r.6	103844298	vacuolar protein sorting-associated protein 2 homolog 3
vvi-u.5	100259680	vacuolar protein sorting-associated protein 2 homolog 2
vvi-u.5	100242937	vacuolar protein sorting-associated protein 2 homolog 3
ppo-u.5	7490692	vacuolar protein sorting-associated protein 2 homolog 2
ppo-u.5	7455048	uncharacterized LOC7455048
mtr-u.5	25484236	vacuolar protein sorting-associated protein 2 homolog 3
mtr-u.5	25486687	vacuolar protein sorting-associated protein 2 homolog 2
mtr-u.5	25499281	vacuolar protein sorting-associated protein 2 homolog 3
ghi-r.1	107930312	vacuolar protein sorting-associated protein 2 homolog 2
ghi-r.1	107952890	vacuolar protein sorting-associated protein 2 homolog 3
ghi-r.1	107955524	vacuolar protein sorting-associated protein 2 homolog 3
bna-r.1	111215041	vacuolar protein sorting-associated protein 2 homolog 2
bna-r.1	125575612	vacuolar protein sorting-associated protein 2 homolog 2-like
bna-r.1	106434277	vacuolar protein sorting-associated protein 2 homolog 2
cit-r.1	102607006	uncharacterized LOC102607006
cit-r.1	102631163	vacuolar protein sorting-associated protein 2 homolog 3
osa-u.5	4348891	vacuolar protein sorting-associated protein 2 homolog 3
osa-u.5	4333538	vacuolar protein sorting-associated protein 2 homolog 2
zma-u.5	100284170	charged multivesicular body protein 2a
zma-u.5	100282251	uncharacterized LOC100282251
tae-r.2	123104925	vacuolar protein sorting-associated protein 2 homolog 2
tae-r.2	123122735	vacuolar protein sorting-associated protein 2 homolog 2
tae-r.2	123045480	vacuolar protein sorting-associated protein 2 homolog 3
hvu-r.1	123452125	vacuolar protein sorting-associated protein 2 homolog 2
hvu-r.1	123430989	vacuolar protein sorting-associated protein 2 homolog 3
sbi-r.1	8067424	vacuolar protein sorting-associated protein 2 homolog 3
sbi-r.1	8057252	vacuolar protein sorting-associated protein 2 homolog 2
bdi-r.1	100840493	vacuolar protein sorting-associated protein 2 homolog 2
bdi-r.1	100839014	vacuolar protein sorting-associated protein 2 homolog 3
cre-r.1	CHLRE_17g735400v5	uncharacterized protein

Top 50 coexpressed genes to 107773829 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107773829 (nta-r.1 coexpression data)

CoexMap"107773829"

[Cytoscape]

Annotation

functional annotation

KEGG

nta04144 [list] [network] Endocytosis (334 genes)

GO BP

GO:0007034 [list] [network] vacuolar transport

(127 genes)

IEA

GO CC

GO MF

Protein

XP_075105215.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, nucl_plas 4, chlo 1, mito 1, plas 1, chlo_mito 1

(predict for XP_075105215.1)

Subcellular
localization
TargetP

other 5, mito 3

(predict for XP_075105215.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107773829	nta-r.1 for 107794710	nta-r.1 for 107784069	nta-r.1 for 107797121	sly-u.5 for 104645908	sly-u.5 for 101266227	sot-r.1 for 102579000	sot-r.1 for 102582862	sot-r.1 for 102591990	ath-u.5 for VPS2.2	ath-u.5 for VPS2.3	gma-u.5 for 100793101	gma-u.5 for 100777179	gma-u.5 for 100306343	bra-r.6 for 103834159	bra-r.6 for 103844298	vvi-u.5 for 100259680	vvi-u.5 for 100242937	ppo-u.5 for 7490692	ppo-u.5 for 7455048	mtr-u.5 for 25484236	mtr-u.5 for 25486687	mtr-u.5 for 25499281	ghi-r.1 for 107930312	ghi-r.1 for 107952890	ghi-r.1 for 107955524	bna-r.1 for 111215041	bna-r.1 for 125575612	bna-r.1 for 106434277	cit-r.1 for 102607006	cit-r.1 for 102631163	osa-u.5 for 4348891	osa-u.5 for 4333538	zma-u.5 for 100284170	zma-u.5 for 100282251	tae-r.2 for 123104925	tae-r.2 for 123122735	tae-r.2 for 123045480	hvu-r.1 for 123452125	hvu-r.1 for 123430989	sbi-r.1 for 8067424	sbi-r.1 for 8057252	bdi-r.1 for 100840493	bdi-r.1 for 100839014	cre-r.1 for CHLRE_17g735400v5

Ortholog

Ortholog ID: 2105

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

VPS2.2

VPS2.3

Function^*

vacuolar protein sorting-associated protein 2 homolog 3-like

vacuolar protein sorting-associated protein 2 homolog 3