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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100284170   charged multivesicular body protein 2a 
 zma-r.6   100284170   charged multivesicular body protein 2a 
 zma-m.5   100284170   charged multivesicular body protein 2a 
 zma-u.5   100282251   uncharacterized LOC100282251 
 osa-u.5   4348891   vacuolar protein sorting-associated protein 2 homolog 3 
 osa-u.5   4333538   vacuolar protein sorting-associated protein 2 homolog 2 
 ath-u.5   VPS2.2   SNF7 family protein 
 ath-u.5   VPS2.3   vacuolar protein sorting-associated protein 2.3 
 gma-u.5   100793101   vacuolar protein sorting-associated protein 2 homolog 2 
 gma-u.5   100777179   vacuolar protein sorting-associated protein 2 homolog 2 
 gma-u.5   100499888   uncharacterized LOC100499888 
 sly-u.5   104645908   vacuolar protein sorting-associated protein 2 homolog 2 
 sly-u.5   101266227   vacuolar protein sorting-associated protein 2 homolog 3 
 vvi-u.5   100242937   vacuolar protein sorting-associated protein 2 homolog 3 
 vvi-u.5   100259680   vacuolar protein sorting-associated protein 2 homolog 2 
 ppo-u.5   7455048   uncharacterized LOC7455048 
 ppo-u.5   7490692   vacuolar protein sorting-associated protein 2 homolog 2 
 mtr-u.5   25499281   vacuolar protein sorting-associated protein 2 homolog 3 
 mtr-u.5   25486687   vacuolar protein sorting-associated protein 2 homolog 2 
 mtr-u.5   25484236   vacuolar protein sorting-associated protein 2 homolog 3 

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Top 50 coexpressed genes to 100284170 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100284170 (zma-u.5 coexpression data)

CoexMap"100284170"


zmaLOC100284170 | Entrez gene ID : 100284170      
Species zma osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 2 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma04144 [list] [network] Endocytosis (208 genes)
GO BP
GO:0007034 [list] [network] vacuolar transport  (74 genes)  IEA  
GO CC
GO MF
Protein NP_001150538.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 2,  cyto 2,  cyto_mito 2,  nucl_plas 2  (predict for NP_001150538.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001150538.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100284170
zma-r.6
for
100284170
zma-m.5
for
100284170
zma-u.5
for
100282251
osa-u.5
for
4348891
osa-u.5
for
4333538
ath-u.5
for
VPS2.2
ath-u.5
for
VPS2.3
gma-u.5
for
100793101
gma-u.5
for
100777179
gma-u.5
for
100499888
sly-u.5
for
104645908
sly-u.5
for
101266227
vvi-u.5
for
100242937
vvi-u.5
for
100259680
ppo-u.5
for
7455048
ppo-u.5
for
7490692
mtr-u.5
for
25499281
mtr-u.5
for
25486687
mtr-u.5
for
25484236


Ortholog ID: 2105
Species zma zma sbi sbi osa osa tae tae hvu hvu bdi bdi ath ath gma gma sly sly bra vvi vvi ppo ppo mtr mtr ghi ghi bna sot sot cit cit nta nta cre
Symbol LOC100284170 LOC100282251 LOC8067424 LOC8057252 LOC4348891 LOC4333538 LOC123181063 LOC123113226 LOC123430989 LOC123452125 LOC100840493 LOC100839014 VPS2.2 VPS2.3 LOC100793101 LOC100306343 LOC104645908 LOC101266227 LOC103834159 LOC100259680 LOC100242937 LOC7455048 LOC7471955 LOC25486687 LOC25499281 LOC107955524 LOC107958637 LOC125583875 LOC102579000 LOC102582862 LOC102607006 LOC102631163 LOC107794710 LOC107797121 CHLRE_17g735400v5
Function* charged multivesicular body protein 2a uncharacterized LOC100282251 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 3 SNF7 family protein vacuolar protein sorting-associated protein 2.3 vacuolar protein sorting-associated protein 2 homolog 2 uncharacterized LOC100306343 vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 3 uncharacterized LOC7455048 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 2-like vacuolar protein sorting-associated protein 2 homolog 2 vacuolar protein sorting-associated protein 2 homolog 3-like uncharacterized LOC102607006 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 3 vacuolar protein sorting-associated protein 2 homolog 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 5
zma04144 Endocytosis 4
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi00062 Fatty acid elongation 2
sbi01040 Biosynthesis of unsaturated fatty acids 2
sbi04146 Peroxisome 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 6
osa03272 Virion - Hepatitis viruses 3
osa03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00510 N-Glycan biosynthesis 2
tae00561 Glycerolipid metabolism 2
tae00564 Glycerophospholipid metabolism 2
tae04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00600 Sphingolipid metabolism 3
hvu04142 Lysosome 3
hvu04120 Ubiquitin mediated proteolysis 3
hvu03420 Nucleotide excision repair 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath04141 Protein processing in endoplasmic reticulum 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 7
gma03250 Viral life cycle - HIV-1 3
gma04142 Lysosome 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 6
sly04145 Phagosome 4
sly04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00541 Biosynthesis of various nucleotide sugars 3
bra01250 Biosynthesis of nucleotide sugars 3
bra00460 Cyanoamino acid metabolism 2
bra00500 Starch and sucrose metabolism 2
bra00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
ppo03250 Viral life cycle - HIV-1 2
ppo04144 Endocytosis 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 7
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100284170 100282251 8067424 8057252 4348891 4333538 123181063 123113226 123430989 123452125 100840493 100839014 834483 839362 100793101 100306343 104645908 101266227 103834159 100259680 100242937 7455048 7471955 25486687 25499281 107955524 107958637 125583875 102579000 102582862 102607006 102631163 107794710 107797121 5725153
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