ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100499888	uncharacterized LOC100499888
gma-r.7	100499888	uncharacterized LOC100499888
gma-m.5	100499888	uncharacterized LOC100499888
gma-u.5	100793101	vacuolar protein sorting-associated protein 2 homolog 2
gma-u.5	100777179	vacuolar protein sorting-associated protein 2 homolog 2
gma-u.5	100306343	uncharacterized LOC100306343
mtr-u.5	25499281	vacuolar protein sorting-associated protein 2 homolog 3
mtr-u.5	25486687	vacuolar protein sorting-associated protein 2 homolog 2
mtr-u.5	25484236	vacuolar protein sorting-associated protein 2 homolog 3
ppo-u.5	7490692	vacuolar protein sorting-associated protein 2 homolog 2
ppo-u.5	7471955	vacuolar protein sorting-associated protein 2 homolog 3
ath-u.5	VPS2.2	SNF7 family protein
ath-u.5	VPS2.3	vacuolar protein sorting-associated protein 2.3
bra-r.6	103844298	vacuolar protein sorting-associated protein 2 homolog 3
bra-r.6	103834159	vacuolar protein sorting-associated protein 2 homolog 2
vvi-u.5	100259680	vacuolar protein sorting-associated protein 2 homolog 2
vvi-u.5	100242937	vacuolar protein sorting-associated protein 2 homolog 3
ghi-r.1	107955524	vacuolar protein sorting-associated protein 2 homolog 3
ghi-r.1	107958637	vacuolar protein sorting-associated protein 2 homolog 3
ghi-r.1	107930312	vacuolar protein sorting-associated protein 2 homolog 2
bna-r.1	125575612	vacuolar protein sorting-associated protein 2 homolog 2-like
bna-r.1	106390906	vacuolar protein sorting-associated protein 2 homolog 2-like
cit-r.1	102631163	vacuolar protein sorting-associated protein 2 homolog 3
cit-r.1	102607006	uncharacterized LOC102607006
sly-u.5	101266227	vacuolar protein sorting-associated protein 2 homolog 3
sly-u.5	104645908	vacuolar protein sorting-associated protein 2 homolog 2
sot-r.1	102582862	vacuolar protein sorting-associated protein 2 homolog 3-like
sot-r.1	102591990	vacuolar protein sorting-associated protein 2 homolog 3-like
sot-r.1	102586046	vacuolar protein sorting-associated protein 2 homolog 3-like
nta-r.1	107773829	vacuolar protein sorting-associated protein 2 homolog 3-like
nta-r.1	107784069	vacuolar protein sorting-associated protein 2 homolog 2-like
nta-r.1	107797121	vacuolar protein sorting-associated protein 2 homolog 2
osa-u.5	4348891	vacuolar protein sorting-associated protein 2 homolog 3
osa-u.5	4333538	vacuolar protein sorting-associated protein 2 homolog 2
zma-u.5	100284170	charged multivesicular body protein 2a
zma-u.5	100282251	uncharacterized LOC100282251
tae-r.2	123045480	vacuolar protein sorting-associated protein 2 homolog 3
tae-r.2	123113226	vacuolar protein sorting-associated protein 2 homolog 2
tae-r.2	123181063	vacuolar protein sorting-associated protein 2 homolog 3
hvu-r.1	123452125	vacuolar protein sorting-associated protein 2 homolog 2
hvu-r.1	123430989	vacuolar protein sorting-associated protein 2 homolog 3
sbi-r.1	8057252	vacuolar protein sorting-associated protein 2 homolog 2
sbi-r.1	8067424	vacuolar protein sorting-associated protein 2 homolog 3
bdi-r.1	100840493	vacuolar protein sorting-associated protein 2 homolog 2
bdi-r.1	100839014	vacuolar protein sorting-associated protein 2 homolog 3
cre-r.1	CHLRE_17g735400v5	uncharacterized protein

Top 50 coexpressed genes to 100499888 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100499888 (gma-u.5 coexpression data)

CoexMap"100499888"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx04144 [list] [network] Endocytosis (291 genes)

GO BP

GO:0032509 [list] [network] endosome transport via multivesicular body sorting pathway	(58 genes)	IEA
GO:0045324 [list] [network] late endosome to vacuole transport	(68 genes)	IEA
GO:0015031 [list] [network] protein transport	(681 genes)	IEA

GO CC

GO:0000815 [list] [network] ESCRT III complex	(21 genes)	IEA
GO:0005771 [list] [network] multivesicular body	(24 genes)	IEA

GO MF

Protein

NP_001237459.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, nucl_plas 4, mito 3, plas 2

(predict for NP_001237459.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001237459.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100499888	gma-r.7 for 100499888	gma-m.5 for 100499888	gma-u.5 for 100793101	gma-u.5 for 100777179	gma-u.5 for 100306343	mtr-u.5 for 25499281	mtr-u.5 for 25486687	mtr-u.5 for 25484236	ppo-u.5 for 7490692	ppo-u.5 for 7471955	ath-u.5 for VPS2.2	ath-u.5 for VPS2.3	bra-r.6 for 103844298	bra-r.6 for 103834159	vvi-u.5 for 100259680	vvi-u.5 for 100242937	ghi-r.1 for 107955524	ghi-r.1 for 107958637	ghi-r.1 for 107930312	bna-r.1 for 125575612	bna-r.1 for 106390906	cit-r.1 for 102631163	cit-r.1 for 102607006	sly-u.5 for 101266227	sly-u.5 for 104645908	sot-r.1 for 102582862	sot-r.1 for 102591990	sot-r.1 for 102586046	nta-r.1 for 107773829	nta-r.1 for 107784069	nta-r.1 for 107797121	osa-u.5 for 4348891	osa-u.5 for 4333538	zma-u.5 for 100284170	zma-u.5 for 100282251	tae-r.2 for 123045480	tae-r.2 for 123113226	tae-r.2 for 123181063	hvu-r.1 for 123452125	hvu-r.1 for 123430989	sbi-r.1 for 8057252	sbi-r.1 for 8067424	bdi-r.1 for 100840493	bdi-r.1 for 100839014	cre-r.1 for CHLRE_17g735400v5

Ortholog

Ortholog ID: 2105

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

VPS2.2

VPS2.3

Function^*

uncharacterized LOC100499888