ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123181063	vacuolar protein sorting-associated protein 2 homolog 3
tae-r.2	123045480	vacuolar protein sorting-associated protein 2 homolog 3
tae-r.2	123121297	vacuolar protein sorting-associated protein 2 homolog 3
tae-r.2	123122735	vacuolar protein sorting-associated protein 2 homolog 2
hvu-r.1	123430989	vacuolar protein sorting-associated protein 2 homolog 3
hvu-r.1	123452125	vacuolar protein sorting-associated protein 2 homolog 2
bdi-r.1	100840493	vacuolar protein sorting-associated protein 2 homolog 2
bdi-r.1	100839014	vacuolar protein sorting-associated protein 2 homolog 3
osa-u.5	4348891	vacuolar protein sorting-associated protein 2 homolog 3
osa-u.5	4333538	vacuolar protein sorting-associated protein 2 homolog 2
zma-u.5	100284170	charged multivesicular body protein 2a
zma-u.5	100282251	uncharacterized LOC100282251
sbi-r.1	8057252	vacuolar protein sorting-associated protein 2 homolog 2
sbi-r.1	8067424	vacuolar protein sorting-associated protein 2 homolog 3
ath-u.5	VPS2.2	SNF7 family protein
ath-u.5	VPS2.3	vacuolar protein sorting-associated protein 2.3
gma-u.5	100793101	vacuolar protein sorting-associated protein 2 homolog 2
gma-u.5	100777179	vacuolar protein sorting-associated protein 2 homolog 2
gma-u.5	100306343	uncharacterized LOC100306343
sly-u.5	104645908	vacuolar protein sorting-associated protein 2 homolog 2
sly-u.5	101266227	vacuolar protein sorting-associated protein 2 homolog 3
bra-r.6	103834159	vacuolar protein sorting-associated protein 2 homolog 2
bra-r.6	103844298	vacuolar protein sorting-associated protein 2 homolog 3
vvi-u.5	100259680	vacuolar protein sorting-associated protein 2 homolog 2
vvi-u.5	100242937	vacuolar protein sorting-associated protein 2 homolog 3
ppo-u.5	7490692	vacuolar protein sorting-associated protein 2 homolog 2
ppo-u.5	7471955	vacuolar protein sorting-associated protein 2 homolog 3
mtr-u.5	25486687	vacuolar protein sorting-associated protein 2 homolog 2
mtr-u.5	25499281	vacuolar protein sorting-associated protein 2 homolog 3
mtr-u.5	25484236	vacuolar protein sorting-associated protein 2 homolog 3
ghi-r.1	107955524	vacuolar protein sorting-associated protein 2 homolog 3
ghi-r.1	107958637	vacuolar protein sorting-associated protein 2 homolog 3
ghi-r.1	107952890	vacuolar protein sorting-associated protein 2 homolog 3
bna-r.1	106434277	vacuolar protein sorting-associated protein 2 homolog 2
bna-r.1	125575612	vacuolar protein sorting-associated protein 2 homolog 2-like
bna-r.1	125583875	vacuolar protein sorting-associated protein 2 homolog 2-like
sot-r.1	102582862	vacuolar protein sorting-associated protein 2 homolog 3-like
sot-r.1	102579000	vacuolar protein sorting-associated protein 2 homolog 2
sot-r.1	102591990	vacuolar protein sorting-associated protein 2 homolog 3-like
cit-r.1	102607006	uncharacterized LOC102607006
cit-r.1	102631163	vacuolar protein sorting-associated protein 2 homolog 3
nta-r.1	107794710	vacuolar protein sorting-associated protein 2 homolog 3
nta-r.1	107784069	vacuolar protein sorting-associated protein 2 homolog 2-like
nta-r.1	107773829	vacuolar protein sorting-associated protein 2 homolog 3-like
cre-r.1	CHLRE_17g735400v5	uncharacterized protein

Top 50 coexpressed genes to 123181063 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123181063 (tae-r.2 coexpression data)

CoexMap"123181063"

[Cytoscape]

Annotation

functional annotation

KEGG

taes04144 [list] [network] Endocytosis (447 genes)

GO BP

GO:0007034 [list] [network] vacuolar transport

(176 genes)

IEA

GO CC

GO MF

Protein

XP_044449213.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl_plas 3, nucl 3, chlo 2, mito 2, plas 2, chlo_mito 2

(predict for XP_044449213.1)

Subcellular
localization
TargetP

other 6

(predict for XP_044449213.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123181063	tae-r.2 for 123045480	tae-r.2 for 123121297	tae-r.2 for 123122735	hvu-r.1 for 123430989	hvu-r.1 for 123452125	bdi-r.1 for 100840493	bdi-r.1 for 100839014	osa-u.5 for 4348891	osa-u.5 for 4333538	zma-u.5 for 100284170	zma-u.5 for 100282251	sbi-r.1 for 8057252	sbi-r.1 for 8067424	ath-u.5 for VPS2.2	ath-u.5 for VPS2.3	gma-u.5 for 100793101	gma-u.5 for 100777179	gma-u.5 for 100306343	sly-u.5 for 104645908	sly-u.5 for 101266227	bra-r.6 for 103834159	bra-r.6 for 103844298	vvi-u.5 for 100259680	vvi-u.5 for 100242937	ppo-u.5 for 7490692	ppo-u.5 for 7471955	mtr-u.5 for 25486687	mtr-u.5 for 25499281	mtr-u.5 for 25484236	ghi-r.1 for 107955524	ghi-r.1 for 107958637	ghi-r.1 for 107952890	bna-r.1 for 106434277	bna-r.1 for 125575612	bna-r.1 for 125583875	sot-r.1 for 102582862	sot-r.1 for 102579000	sot-r.1 for 102591990	cit-r.1 for 102607006	cit-r.1 for 102631163	nta-r.1 for 107794710	nta-r.1 for 107784069	nta-r.1 for 107773829	cre-r.1 for CHLRE_17g735400v5

Ortholog

Ortholog ID: 2105

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

VPS2.2

VPS2.3

Function^*

vacuolar protein sorting-associated protein 2 homolog 3