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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107775862   uncharacterized LOC107775862 
 sly-u.5   101253553   pentatricopeptide repeat-containing protein At4g20090 
 ath-u.5   EMB1025   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100801994   pentatricopeptide repeat-containing protein At4g20090 
 vvi-u.5   100249022   pentatricopeptide repeat-containing protein At4g20090 
 ppo-u.5   7491468   pentatricopeptide repeat-containing protein At4g20090 
 ppo-u.5   7465363   pentatricopeptide repeat-containing protein At4g20090 
 mtr-u.5   11444332   pentatricopeptide repeat-containing protein At4g20090 
 osa-u.5   9268066   pentatricopeptide repeat-containing protein At4g20090 
 zma-u.5   118476028   uncharacterized LOC118476028 

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Top 50 coexpressed genes to 107775862 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107775862 (nta-r.1 coexpression data)

CoexMap"107775862"


ntaLOC107775862 | Entrez gene ID : 107775862      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007005 [list] [network] mitochondrion organization  (150 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (1135 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1174 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016451142.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  extr 1  (predict for XP_016451142.2)
Subcellular
localization
TargetP
scret 3  (predict for XP_016451142.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107775862
sly-u.5
for
101253553
ath-u.5
for
EMB1025
gma-u.5
for
100801994
vvi-u.5
for
100249022
ppo-u.5
for
7491468
ppo-u.5
for
7465363
mtr-u.5
for
11444332
osa-u.5
for
9268066
zma-u.5
for
118476028


Ortholog ID: 11710
Species nta nta sly sot ath gma bra vvi ppo ppo mtr ghi ghi bna bna cit osa zma tae hvu sbi bdi
Symbol LOC107775862 LOC107800787 LOC101253553 LOC102595408 EMB1025 LOC100801994 LOC103857964 LOC100249022 LOC7491468 LOC7465363 LOC11444332 LOC107914093 LOC107957685 LOC106438057 LOC106365937 LOC102608678 LOC9268066 LOC118476028 LOC123168566 LOC123411413 LOC8060853 LOC100840200
Function* uncharacterized LOC107775862 uncharacterized LOC107800787 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090-like pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 uncharacterized LOC118476028 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00052 Galactose metabolism 2
nta03083 Polycomb repressive complex 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03082 ATP-dependent chromatin remodeling 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107775862 107800787 101253553 102595408 827754 100801994 103857964 100249022 7491468 7465363 11444332 107914093 107957685 106438057 106365937 102608678 9268066 118476028 123168566 123411413 8060853 100840200
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