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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107780579   phosphoglucan phosphatase LSF2, chloroplastic 
 sly-u.5   101259052   phosphoglucan phosphatase LSF2, chloroplastic 
 sot-r.1   102605583   phosphoglucan phosphatase LSF2, chloroplastic 
 ath-u.5   LSF2   dual specificity protein phosphatase (DsPTP1) family protein 
 gma-u.5   100805592   phosphoglucan phosphatase LSF2, chloroplastic 
 gma-u.5   100787079   phosphoglucan phosphatase LSF2, chloroplastic 
 bra-r.6   103870419   phosphoglucan phosphatase LSF2, chloroplastic 
 vvi-u.5   100251903   phosphoglucan phosphatase LSF2, chloroplastic 
 ppo-u.5   7453571   phosphoglucan phosphatase LSF2, chloroplastic 
 mtr-u.5   25489853   phosphoglucan phosphatase LSF2, chloroplastic 
 ghi-r.1   107904743   phosphoglucan phosphatase LSF2, chloroplastic 
 bna-r.1   106452641   phosphoglucan phosphatase LSF2, chloroplastic 
 bna-r.1   106452723   phosphoglucan phosphatase LSF2, chloroplastic 
 cit-r.1   102622989   phosphoglucan phosphatase LSF2, chloroplastic 
 osa-u.5   4349591   phosphoglucan phosphatase LSF2, chloroplastic 
 osa-u.5   4351304   phosphoglucan phosphatase LSF2, chloroplastic 
 zma-u.5   732726   uncharacterized LOC732726 
 tae-r.2   123111368   phosphoglucan phosphatase LSF2, chloroplastic 
 tae-r.2   123103172   phosphoglucan phosphatase LSF2, chloroplastic 
 tae-r.2   123120366   phosphoglucan phosphatase LSF2, chloroplastic 
 hvu-r.1   123397925   phosphoglucan phosphatase LSF2, chloroplastic 
 sbi-r.1   8066946   phosphoglucan phosphatase LSF2, chloroplastic 
 bdi-r.1   100840963   phosphoglucan phosphatase LSF2, chloroplastic 
 cre-r.1   CHLRE_09g403050v5   uncharacterized protein 

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Top 50 coexpressed genes to 107780579 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107780579 (nta-r.1 coexpression data)

CoexMap"107780579"


ntaLOC107780579 | Entrez gene ID : 107780579      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 1 1 2 1 1 1 1 1 2 1 2 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005983 [list] [network] starch catabolic process  (5 genes)  IEA  
GO:0006470 [list] [network] protein dephosphorylation  (255 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1165 genes)  IEA  
GO MF
GO:2001070 [list] [network] starch binding  (19 genes)  IEA  
GO:0019203 [list] [network] carbohydrate phosphatase activity  (65 genes)  IEA  
Protein XP_016456610.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 2,  cysk_nucl 2,  chlo 1,  cyto 1,  mito_plas 1  (predict for XP_016456610.2)
Subcellular
localization
TargetP
other 6  (predict for XP_016456610.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107780579
sly-u.5
for
101259052
sot-r.1
for
102605583
ath-u.5
for
LSF2
gma-u.5
for
100805592
gma-u.5
for
100787079
bra-r.6
for
103870419
vvi-u.5
for
100251903
ppo-u.5
for
7453571
mtr-u.5
for
25489853
ghi-r.1
for
107904743
bna-r.1
for
106452641
bna-r.1
for
106452723
cit-r.1
for
102622989
osa-u.5
for
4349591
osa-u.5
for
4351304
zma-u.5
for
732726
tae-r.2
for
123111368
tae-r.2
for
123103172
tae-r.2
for
123120366
hvu-r.1
for
123397925
sbi-r.1
for
8066946
bdi-r.1
for
100840963
cre-r.1
for
CHLRE_09g403050v5


Ortholog ID: 10755
Species nta sly sot ath gma gma bra vvi ppo mtr ghi bna bna cit osa osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107780579 LOC101259052 LOC102605583 LSF2 LOC100805592 LOC100787079 LOC103870419 LOC100251903 LOC7453571 LOC25489853 LOC107904743 LOC106452641 LOC106452723 LOC102622989 LOC4349591 LOC4351304 LOC732726 LOC123111368 LOC123103172 LOC123120366 LOC123397925 LOC8066946 LOC100840963 CHLRE_09g403050v5
Function* phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic dual specificity protein phosphatase (DsPTP1) family protein phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic uncharacterized LOC732726 phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic phosphoglucan phosphatase LSF2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04120 Ubiquitin mediated proteolysis 3
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 4
bra04517 IgSF CAM signaling 4
bra04814 Motor proteins 4
bra00620 Pyruvate metabolism 2
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 4
osa00230 Purine metabolism 4
osa00220 Arginine biosynthesis 3
osa01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00220 Arginine biosynthesis 2
osa01210 2-Oxocarboxylic acid metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 8
zma01240 Biosynthesis of cofactors 6
zma00010 Glycolysis / Gluconeogenesis 4
zma00052 Galactose metabolism 4
zma00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00052 Galactose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae00190 Oxidative phosphorylation 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 2
bdi00620 Pyruvate metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107780579 101259052 102605583 820265 100805592 100787079 103870419 100251903 7453571 25489853 107904743 106452641 106452723 102622989 4349591 4351304 732726 123111368 123103172 123120366 123397925 8066946 100840963 5720738
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