ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107782467	polygalacturonase At1g48100-like
nta-r.1	107802133	polygalacturonase At1g48100-like
nta-r.1	107816578	polygalacturonase At1g48100-like
nta-r.1	107761253	polygalacturonase At1g48100
sly-u.5	101259291	polygalacturonase At1g48100
sly-u.5	101266864	polygalacturonase At1g48100
sly-u.5	101261316	polygalacturonase At1g48100
sot-r.1	102589249	polygalacturonase At1g48100
sot-r.1	102593770	polygalacturonase At1g48100-like
ath-u.5	AT1G02460	Pectin lyase-like superfamily protein
ath-u.5	AT1G48100	Pectin lyase-like superfamily protein
gma-u.5	PG7	polygalacturonase precursor
gma-u.5	100820085	polygalacturonase At1g48100
gma-u.5	100809979	polygalacturonase At1g48100
bra-r.6	103871496	polygalacturonase At1g48100
bra-r.6	103844581	polygalacturonase At1g48100
bra-r.6	103843750	polygalacturonase At1g48100
vvi-u.5	100264928	polygalacturonase At1g48100
vvi-u.5	100263206	polygalacturonase At1g48100
mtr-u.5	11410191	polygalacturonase At1g48100
mtr-u.5	11412440	polygalacturonase At1g48100
mtr-u.5	11435306	polygalacturonase At1g48100
ghi-r.1	107910548	polygalacturonase At1g48100
bna-r.1	106352669	polygalacturonase At1g48100-like
bna-r.1	106346401	polygalacturonase At1g48100
bna-r.1	106370081	polygalacturonase At1g48100
cit-r.1	102625396	polygalacturonase At1g48100
osa-u.5	4326983	polygalacturonase At1g48100
osa-u.5	4326721	polygalacturonase At1g48100
osa-u.5	4338287	polygalacturonase At1g48100
zma-u.5	100194076	uncharacterized LOC100194076
zma-u.5	103635045	polygalacturonase At1g48100
zma-u.5	103635108	polygalacturonase At1g48100
tae-r.2	123168859	polygalacturonase At1g48100
tae-r.2	123160906	polygalacturonase At1g48100
tae-r.2	123182459	polygalacturonase At1g48100
hvu-r.1	123413542	polygalacturonase At1g48100-like
hvu-r.1	123410081	polygalacturonase At1g48100-like
sbi-r.1	8075300	polygalacturonase At1g48100
sbi-r.1	8060309	polygalacturonase At1g48100
bdi-r.1	100827672	polygalacturonase At1g48100
bdi-r.1	100821491	polygalacturonase At1g48100

Annotation

functional annotation

KEGG

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(1425 genes)

IEA

GO CC

GO MF

GO:0004650 [list] [network] polygalacturonase activity

(108 genes)

IEA

Protein

XP_016458838.2 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, vacu 3, chlo 2, nucl 1, plas 1, nucl_plas 1

(predict for XP_016458838.2)

Subcellular
localization
TargetP

scret 9

(predict for XP_016458838.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107782467	nta-r.1 for 107802133	nta-r.1 for 107816578	nta-r.1 for 107761253	sly-u.5 for 101259291	sly-u.5 for 101266864	sly-u.5 for 101261316	sot-r.1 for 102589249	sot-r.1 for 102593770	ath-u.5 for AT1G02460	ath-u.5 for AT1G48100	gma-u.5 for PG7	gma-u.5 for 100820085	gma-u.5 for 100809979	bra-r.6 for 103871496	bra-r.6 for 103844581	bra-r.6 for 103843750	vvi-u.5 for 100264928	vvi-u.5 for 100263206	mtr-u.5 for 11410191	mtr-u.5 for 11412440	mtr-u.5 for 11435306	ghi-r.1 for 107910548	bna-r.1 for 106352669	bna-r.1 for 106346401	bna-r.1 for 106370081	cit-r.1 for 102625396	osa-u.5 for 4326983	osa-u.5 for 4326721	osa-u.5 for 4338287	zma-u.5 for 100194076	zma-u.5 for 103635045	zma-u.5 for 103635108	tae-r.2 for 123168859	tae-r.2 for 123160906	tae-r.2 for 123182459	hvu-r.1 for 123413542	hvu-r.1 for 123410081	sbi-r.1 for 8075300	sbi-r.1 for 8060309	bdi-r.1 for 100827672	bdi-r.1 for 100821491

Ortholog

Ortholog ID: 1363

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*