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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107784599   THO complex subunit 3 
 sly-u.5   101265940   THO complex subunit 3 
 ath-u.5   TEX1   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100812126   THO complex subunit 3 
 gma-u.5   100782507   THO complex subunit 3 
 vvi-u.5   100241262   THO complex subunit 3 
 ppo-u.5   7457665   THO complex subunit 3 
 mtr-u.5   11438034   THO complex subunit 3 
 osa-u.5   4346657   THO complex subunit 3 
 zma-u.5   100272607   uncharacterized LOC100272607 

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Top 50 coexpressed genes to 107784599 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107784599 (nta-r.1 coexpression data)

CoexMap"107784599"


ntaLOC107784599 | Entrez gene ID : 107784599    
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03013 [list] [network] Nucleocytoplasmic transport (255 genes)
nta03040 [list] [network] Spliceosome (402 genes)
GO BP
GO:0006406 [list] [network] mRNA export from nucleus  (63 genes)  IEA  
GO CC
GO:0000445 [list] [network] THO complex part of transcription export complex  (12 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016461236.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_E.R. 2,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016461236.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016461236.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107784599
sly-u.5
for
101265940
ath-u.5
for
TEX1
gma-u.5
for
100812126
gma-u.5
for
100782507
vvi-u.5
for
100241262
ppo-u.5
for
7457665
mtr-u.5
for
11438034
osa-u.5
for
4346657
zma-u.5
for
100272607


Ortholog ID: 10399
Species nta nta sly sot ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC107759125 LOC107784599 LOC101265940 LOC102597071 TEX1 LOC100812126 LOC100782507 LOC103845047 LOC100241262 LOC7457665 LOC11438034 LOC107931189 LOC107903400 LOC106397248 LOC106385055 LOC102626591 LOC4346657 LOC100272607 LOC123103455 LOC123121123 LOC123398371 LOC8071866 LOC100838230 CHLRE_12g559850v5
Function* THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 Transducin/WD40 repeat-like superfamily protein THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 uncharacterized LOC100272607 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 THO complex subunit 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00564 Glycerophospholipid metabolism 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta00564 Glycerophospholipid metabolism 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
sot04075 Plant hormone signal transduction 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03050 Proteasome 2
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 9
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03010 Ribosome 3
mtr03050 Proteasome 3
mtr03018 RNA degradation 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi03018 RNA degradation 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi03018 RNA degradation 2
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
bna00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03013 Nucleocytoplasmic transport 3
tae03010 Ribosome 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03010 Ribosome 4
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107759125 107784599 101265940 102597071 835712 100812126 100782507 103845047 100241262 7457665 11438034 107931189 107903400 106397248 106385055 102626591 4346657 100272607 123103455 123121123 123398371 8071866 100838230 5728678
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