Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107787244   DExH-box ATP-dependent RNA helicase DExH1 
 nta-r.1   107798029   DExH-box ATP-dependent RNA helicase DExH1 
 sly-u.5   101264453   DExH-box ATP-dependent RNA helicase DExH1 
 sot-r.1   102584740   ATP-dependent RNA helicase DHX36 
 ath-u.5   AT2G35920   RNA helicase family protein 
 gma-u.5   100792823   DExH-box ATP-dependent RNA helicase DExH1 
 gma-u.5   100792623   DExH-box ATP-dependent RNA helicase DExH1 
 bra-r.6   103857598   DExH-box ATP-dependent RNA helicase DExH1 
 vvi-u.5   100252028   DExH-box ATP-dependent RNA helicase DExH1 
 ppo-u.5   7469944   DExH-box ATP-dependent RNA helicase DExH1 
 mtr-u.5   11424426   DExH-box ATP-dependent RNA helicase DExH1 
 ghi-r.1   107948284   DExH-box ATP-dependent RNA helicase DExH1 
 ghi-r.1   107899406   DExH-box ATP-dependent RNA helicase DExH1 
 bna-r.1   106388140   DExH-box ATP-dependent RNA helicase DExH1 
 bna-r.1   125606449   DExH-box ATP-dependent RNA helicase DExH1-like 
 cit-r.1   102628348   DExH-box ATP-dependent RNA helicase DExH1 
 osa-u.5   4348871   DExH-box ATP-dependent RNA helicase DExH1 
 zma-u.5   103643471   DExH-box ATP-dependent RNA helicase DExH1 
 tae-r.2   123045164   DExH-box ATP-dependent RNA helicase DExH1 
 tae-r.2   123120865   DExH-box ATP-dependent RNA helicase DExH1 
 tae-r.2   123181008   DExH-box ATP-dependent RNA helicase DExH1 
 hvu-r.1   123430684   DExH-box ATP-dependent RNA helicase DExH1 
 sbi-r.1   8070497   DExH-box ATP-dependent RNA helicase DExH1 
 bdi-r.1   100834725   DExH-box ATP-dependent RNA helicase DExH1 
 cre-r.1   CHLRE_03g171650v5   uncharacterized protein 
 cre-r.1   CHLRE_12g492450v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107787244 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107787244 (nta-r.1 coexpression data)

CoexMap"107787244"


ntaLOC107787244 | Entrez gene ID : 107787244      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 2 1 1 1 1 2 2 1 1 1 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03018 [list] [network] RNA degradation (211 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO:0005622 [list] [network] intracellular anatomical structure  (13807 genes)  IEA  
GO MF
GO:0004386 [list] [network] helicase activity  (420 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
Protein XP_016464273.2 [sequence] [blastp]
XP_075079064.1 [sequence] [blastp]
XP_075079065.1 [sequence] [blastp]
XP_075079066.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016464273.2)
cyto 4,  chlo 3,  cyto_nucl 3  (predict for XP_075079064.1)
cyto 4,  chlo 3,  cyto_nucl 3  (predict for XP_075079065.1)
cyto 4,  nucl 3,  chlo 1,  plas 1,  vacu 1,  pero 1  (predict for XP_075079066.1)
Subcellular
localization
TargetP
mito 6,  chlo 3  (predict for XP_016464273.2)
chlo 7,  other 3  (predict for XP_075079064.1)
chlo 7,  other 3  (predict for XP_075079065.1)
chlo 8,  other 3  (predict for XP_075079066.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107787244
nta-r.1
for
107798029
sly-u.5
for
101264453
sot-r.1
for
102584740
ath-u.5
for
AT2G35920
gma-u.5
for
100792823
gma-u.5
for
100792623
bra-r.6
for
103857598
vvi-u.5
for
100252028
ppo-u.5
for
7469944
mtr-u.5
for
11424426
ghi-r.1
for
107948284
ghi-r.1
for
107899406
bna-r.1
for
106388140
bna-r.1
for
125606449
cit-r.1
for
102628348
osa-u.5
for
4348871
zma-u.5
for
103643471
tae-r.2
for
123045164
tae-r.2
for
123120865
tae-r.2
for
123181008
hvu-r.1
for
123430684
sbi-r.1
for
8070497
bdi-r.1
for
100834725
cre-r.1
for
CHLRE_03g171650v5
cre-r.1
for
CHLRE_12g492450v5


Ortholog ID: 8904
Species nta nta sly sot ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre cre
Symbol LOC107787244 LOC107798029 LOC101264453 LOC102584740 AT2G35920 LOC100792823 LOC100792623 LOC103857598 LOC100252028 LOC7469944 LOC11424426 LOC107948284 LOC107899406 LOC106388140 LOC125606449 LOC102628348 LOC4348871 LOC103643471 LOC123045164 LOC123120865 LOC123181008 LOC123430684 LOC8070497 LOC100834725 CHLRE_03g171650v5 CHLRE_12g492450v5
Function* DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 ATP-dependent RNA helicase DHX36 RNA helicase family protein DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1-like DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 DExH-box ATP-dependent RNA helicase DExH1 uncharacterized protein uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03015 mRNA surveillance pathway 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03018 RNA degradation 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 10
ghi04626 Plant-pathogen interaction 6
ghi03013 Nucleocytoplasmic transport 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 8
ghi04075 Plant hormone signal transduction 8
ghi04626 Plant-pathogen interaction 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 13
bna03018 RNA degradation 2
bna03030 DNA replication 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 13
bna03018 RNA degradation 2
bna03030 DNA replication 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03018 RNA degradation 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae00310 Lysine degradation 3
tae03013 Nucleocytoplasmic transport 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03018 RNA degradation 4
tae03082 ATP-dependent chromatin remodeling 3
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107787244 107798029 101264453 102584740 818165 100792823 100792623 103857598 100252028 7469944 11424426 107948284 107899406 106388140 125606449 102628348 4348871 103643471 123045164 123120865 123181008 123430684 8070497 100834725 5728925 5726131
The preparation time of this page was 0.1 [sec].