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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107791225   uncharacterized LOC107791225 
 nta-r.1   107830412   transcription termination factor MTEF18, mitochondrial-like 
 nta-r.1   107807800   zinc finger BED domain-containing protein RICESLEEPER 2-like 
 nta-r.1   107759636   transcription termination factor MTERF8, chloroplastic-like 
 sly-u.5   101255083   transcription termination factor MTERF5, chloroplastic-like 
 sly-u.5   101266630   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 sly-u.5   101268097   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 sot-r.1   102602747   uncharacterized LOC102602747 
 sot-r.1   102587512   uncharacterized LOC102587512 
 sot-r.1   102585481   uncharacterized LOC102585481 
 ath-u.5   AT5G07900   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT5G64950   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT1G21150   Mitochondrial transcription termination factor family protein 
 gma-u.5   106799612   uncharacterized LOC106799612 
 gma-u.5   100813396   transcription termination factor MTERF15, mitochondrial 
 gma-u.5   100806920   transcription termination factor MTERF15, mitochondrial 
 bra-r.6   103862768   uncharacterized LOC103862768 
 bra-r.6   103858260   transcription termination factor MTERF8, chloroplastic 
 vvi-u.5   100266539   transcription termination factor MTERF2, chloroplastic-like 
 vvi-u.5   100246295   uncharacterized LOC100246295 
 vvi-u.5   100249689   transcription termination factor MTERF2, chloroplastic 
 ppo-u.5   7463617   transcription termination factor MTERF8, chloroplastic 
 ppo-u.5   7476812   uncharacterized LOC7476812 
 mtr-u.5   25501781   transcription termination factor MTERF5, chloroplastic 
 mtr-u.5   25494089   uncharacterized LOC25494089 
 mtr-u.5   25491192   uncharacterized LOC25491192 
 ghi-r.1   107920427   transcription termination factor MTERF5, chloroplastic 
 ghi-r.1   107938297   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 ghi-r.1   107940488   transcription termination factor MTERF8, chloroplastic 
 bna-r.1   106445416   transcription termination factor MTERF15, mitochondrial-like 
 bna-r.1   106365769   transcription termination factor MTERF4, chloroplastic-like 
 bna-r.1   BNAC01G30050D   transcription termination factor MTERF2, chloroplastic 
 cit-r.1   102610905   hypothetical protein 
 cit-r.1   102610867   uncharacterized LOC102610867 
 cit-r.1   102615995   transcription termination factor MTERF5, chloroplastic-like 
 osa-u.5   4340536   transcription termination factor MTERF4, chloroplastic 
 osa-u.5   4338789   transcription termination factor MTERF8, chloroplastic 
 osa-u.5   4350029   uncharacterized LOC4350029 
 zma-u.5   100284682   uncharacterized LOC100284682 
 zma-u.5   100191160   uncharacterized LOC100191160 
 zma-u.5   100193389   uncharacterized LOC100193389 
 tae-r.2   123088006   transcription termination factor MTERF9, chloroplastic 
 tae-r.2   123135588   uncharacterized LOC123135588 
 tae-r.2   123080704   uncharacterized LOC123080704 
 hvu-r.1   123401957   uncharacterized LOC123401957 
 hvu-r.1   123402280   uncharacterized LOC123402280 
 sbi-r.1   8066534   transcription termination factor MTERF15, mitochondrial 
 sbi-r.1   8071051   transcription termination factor MTERF15, mitochondrial 
 sbi-r.1   8071326   uncharacterized LOC8071326 
 bdi-r.1   112268504   transcription termination factor MTEF1, chloroplastic-like 
 bdi-r.1   100837156   uncharacterized LOC100837156 
 bdi-r.1   100826866   transcription termination factor MTERF8, chloroplastic 

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Top 50 coexpressed genes to 107791225 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107791225 (nta-r.1 coexpression data)

CoexMap"107791225"


ntaLOC107791225 | Entrez gene ID : 107791225    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 2 3 2 3 3 3 3 3 3 3 2 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2987 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (968 genes)  IEA  
Protein XP_075082481.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 4,  cyto 1,  vacu 1  (predict for XP_075082481.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_075082481.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107791225
nta-r.1
for
107830412
nta-r.1
for
107807800
nta-r.1
for
107759636
sly-u.5
for
101255083
sly-u.5
for
101266630
sly-u.5
for
101268097
sot-r.1
for
102602747
sot-r.1
for
102587512
sot-r.1
for
102585481
ath-u.5
for
AT5G07900
ath-u.5
for
AT5G64950
ath-u.5
for
AT1G21150
gma-u.5
for
106799612
gma-u.5
for
100813396
gma-u.5
for
100806920
bra-r.6
for
103862768
bra-r.6
for
103858260
vvi-u.5
for
100266539
vvi-u.5
for
100246295
vvi-u.5
for
100249689
ppo-u.5
for
7463617
ppo-u.5
for
7476812
mtr-u.5
for
25501781
mtr-u.5
for
25494089
mtr-u.5
for
25491192
ghi-r.1
for
107920427
ghi-r.1
for
107938297
ghi-r.1
for
107940488
bna-r.1
for
106445416
bna-r.1
for
106365769
bna-r.1
for
BNAC01G30050D
cit-r.1
for
102610905
cit-r.1
for
102610867
cit-r.1
for
102615995
osa-u.5
for
4340536
osa-u.5
for
4338789
osa-u.5
for
4350029
zma-u.5
for
100284682
zma-u.5
for
100191160
zma-u.5
for
100193389
tae-r.2
for
123088006
tae-r.2
for
123135588
tae-r.2
for
123080704
hvu-r.1
for
123401957
hvu-r.1
for
123402280
sbi-r.1
for
8066534
sbi-r.1
for
8071051
sbi-r.1
for
8071326
bdi-r.1
for
112268504
bdi-r.1
for
100837156
bdi-r.1
for
100826866


Ortholog ID: 37
Species nta nta nta sly sly sly sot sot sot ath ath ath gma gma gma bra bra vvi vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC107759636 LOC107777294 LOC107826212 LOC101268097 LOC101267803 LOC101258025 LOC102588163 LOC102585626 LOC102589966 AT5G07900 AT5G64950 AT1G21150 LOC100806920 LOC102661687 LOC106796317 LOC103862768 LOC103858260 LOC100246295 LOC100258309 LOC100241175 LOC18094344 LOC18111233 LOC25494089 LOC11422280 LOC25501780 LOC107931417 LOC121204522 LOC107916058 LOC106365769 LOC106418515 BNAC03G44350D LOC102619962 LOC102622219 LOC127900674 LOC4343048 LOC4338741 LOC100284682 LOC100285204 LOC100193811 LOC123080704 LOC123145473 LOC123145472 LOC123401732 LOC123411721 LOC8057363 LOC8057353 LOC8062993 LOC100837156 LOC100840205
Function* transcription termination factor MTERF8, chloroplastic-like transcription termination factor MTERF15, mitochondrial-like transcription termination factor MTERF8, chloroplastic-like transcription termination factor MTERF6, chloroplastic/mitochondrial uncharacterized LOC101267803 transcription termination factor MTERF9, chloroplastic uncharacterized LOC102588163 uncharacterized LOC102585626 uncharacterized LOC102589966 Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein transcription termination factor MTERF15, mitochondrial uncharacterized LOC102661687 uncharacterized LOC106796317 uncharacterized LOC103862768 transcription termination factor MTERF8, chloroplastic uncharacterized LOC100246295 transcription termination factor MTERF15, mitochondrial transcription termination factor MTERF9, chloroplastic-like transcription termination factor MTERF9, chloroplastic uncharacterized LOC18111233 uncharacterized LOC25494089 uncharacterized LOC11422280 uncharacterized LOC25501780 uncharacterized LOC107931417 transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF4, chloroplastic-like transcription termination factor MTERF2, chloroplastic-like transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF2, chloroplastic-like uncharacterized LOC102622219 transcription termination factor MTERF15, mitochondrial-like transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF4, chloroplastic uncharacterized LOC100284682 uncharacterized LOC100285204 uncharacterized LOC100193811 uncharacterized LOC123080704 transcription termination factor MTERF8, chloroplastic uncharacterized LOC123145472 transcription termination factor MTERF8, chloroplastic-like uncharacterized LOC123411721 uncharacterized LOC8057363 transcription termination factor MTEF1, chloroplastic uncharacterized LOC8062993 uncharacterized LOC100837156 uncharacterized LOC100840205
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
sot00280 Valine, leucine and isoleucine degradation 2
sot00270 Cysteine and methionine metabolism 2
sot00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 3
gma01212 Fatty acid metabolism 3
gma00620 Pyruvate metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00190 Oxidative phosphorylation 2
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00860 Porphyrin metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
bdi03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107759636 107777294 107826212 101268097 101267803 101258025 102588163 102585626 102589966 830684 836619 838711 100806920 102661687 106796317 103862768 103858260 100246295 100258309 100241175 18094344 18111233 25494089 11422280 25501780 107931417 121204522 107916058 106365769 106418515 106434119 102619962 102622219 127900674 4343048 4338741 100284682 100285204 100193811 123080704 123145473 123145472 123401732 123411721 8057363 8057353 8062993 100837156 100840205
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