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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107792828   serine/arginine-rich splicing factor SR34A 
 nta-r.1   107799110   serine/arginine-rich splicing factor SR34A 
 nta-r.1   107790816   serine/arginine-rich-splicing factor SR34 
 nta-r.1   107823071   serine/arginine-rich-splicing factor SR34 
 sly-u.5   101257670   serine/arginine-rich-splicing factor SR34 
 sly-u.5   101247256   serine/arginine-rich-splicing factor SR34 
 sly-u.5   101257012   serine/arginine-rich splicing factor SR30 
 sot-r.1   102584103   serine/arginine-rich-splicing factor SR34-like 
 sot-r.1   102592958   serine/arginine-rich-splicing factor SR34-like 
 ath-u.5   SR34   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   SR34a   SER/ARG-rich protein 34A 
 ath-u.5   SR34b   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100794282   serine/arginine-rich splicing factor SR30 
 gma-u.5   100789847   serine/arginine-rich-splicing factor SR34 
 gma-u.5   100796900   pre-mRNA-splicing factor SF2-like 
 bra-r.6   103836748   serine/arginine-rich-splicing factor SR34 
 bra-r.6   103871643   serine/arginine-rich splicing factor SR30 
 bra-r.6   103873059   serine/arginine-rich splicing factor SR34A 
 vvi-u.5   100249315   serine/arginine-rich splicing factor SR30 
 vvi-u.5   100255499   serine/arginine-rich-splicing factor SR34 
 vvi-u.5   100853709   serine/arginine-rich splicing factor SR34A 
 ppo-u.5   18098659   serine/arginine-rich splicing factor SR30 
 ppo-u.5   18103658   serine/arginine-rich splicing factor SR34A 
 ppo-u.5   18096446   serine/arginine-rich-splicing factor SR34 
 mtr-u.5   11412312   serine/arginine-rich splicing factor SR30 
 mtr-u.5   11430819   serine/arginine-rich splicing factor SR34A 
 mtr-u.5   11424462   serine/arginine-rich splicing factor SR30 
 ghi-r.1   107922771   serine/arginine-rich splicing factor SR34A 
 ghi-r.1   107914332   serine/arginine-rich splicing factor SR30 
 ghi-r.1   107904549   serine/arginine-rich splicing factor SR34A 
 bna-r.1   106347782   serine/arginine-rich splicing factor SR34A 
 bna-r.1   111200818   serine/arginine-rich-splicing factor SR34 
 bna-r.1   125601106   serine/arginine-rich-splicing factor SR34-like 
 cit-r.1   102626504   serine/arginine-rich-splicing factor SR34 
 cit-r.1   102615989   serine/arginine-rich splicing factor SR30-like 
 cit-r.1   102611169   serine/arginine-rich splicing factor SR34A 
 osa-u.5   4332806   serine/arginine-rich-splicing factor SR34 
 osa-u.5   4344256   serine/arginine-rich-splicing factor SR34 
 osa-u.5   4338552   serine/arginine-rich-splicing factor SR34 
 zma-u.5   100217203   uncharacterized LOC100217203 
 zma-u.5   100284054   pre-mRNA-splicing factor SF2 
 zma-u.5   100285019   uncharacterized LOC100285019 
 tae-r.2   123061814   serine/arginine-rich-splicing factor SR34 
 tae-r.2   123129630   serine/arginine-rich-splicing factor SR34 
 tae-r.2   123097510   serine/arginine-rich-splicing factor SR34 
 hvu-r.1   123448632   serine/arginine-rich splicing factor SR34A-like 
 hvu-r.1   123444166   serine/arginine-rich-splicing factor SR34-like 
 hvu-r.1   123424755   serine/arginine-rich-splicing factor SR34-like 
 sbi-r.1   8079637   serine/arginine-rich splicing factor SR30 
 sbi-r.1   110430546   serine/arginine-rich-splicing factor SR34-like 
 sbi-r.1   8082304   serine/arginine-rich-splicing factor SR34 
 bdi-r.1   100834993   serine/arginine-rich-splicing factor SR34 
 bdi-r.1   100842985   serine/arginine-rich-splicing factor SR34 
 bdi-r.1   100840113   serine/arginine-rich splicing factor SR30 
 cre-r.1   CHLRE_01g026450v5   uncharacterized protein 

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Top 50 coexpressed genes to 107792828 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107792828 (nta-r.1 coexpression data)

CoexMap"107792828"


ntaLOC107792828 | Entrez gene ID : 107792828      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03040 [list] [network] Spliceosome (402 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
Protein XP_016470554.1 [sequence] [blastp]
XP_016470555.1 [sequence] [blastp]
XP_016470557.1 [sequence] [blastp]
XP_075096725.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 4  (predict for XP_016470554.1)
nucl 5,  mito 4  (predict for XP_016470555.1)
nucl 6,  mito 4  (predict for XP_016470557.1)
nucl 5,  mito 4  (predict for XP_075096725.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for XP_016470554.1)
other 8,  mito 4  (predict for XP_016470555.1)
other 8,  mito 3  (predict for XP_016470557.1)
other 8,  mito 4  (predict for XP_075096725.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107792828
nta-r.1
for
107799110
nta-r.1
for
107790816
nta-r.1
for
107823071
sly-u.5
for
101257670
sly-u.5
for
101247256
sly-u.5
for
101257012
sot-r.1
for
102584103
sot-r.1
for
102592958
ath-u.5
for
SR34
ath-u.5
for
SR34a
ath-u.5
for
SR34b
gma-u.5
for
100794282
gma-u.5
for
100789847
gma-u.5
for
100796900
bra-r.6
for
103836748
bra-r.6
for
103871643
bra-r.6
for
103873059
vvi-u.5
for
100249315
vvi-u.5
for
100255499
vvi-u.5
for
100853709
ppo-u.5
for
18098659
ppo-u.5
for
18103658
ppo-u.5
for
18096446
mtr-u.5
for
11412312
mtr-u.5
for
11430819
mtr-u.5
for
11424462
ghi-r.1
for
107922771
ghi-r.1
for
107914332
ghi-r.1
for
107904549
bna-r.1
for
106347782
bna-r.1
for
111200818
bna-r.1
for
125601106
cit-r.1
for
102626504
cit-r.1
for
102615989
cit-r.1
for
102611169
osa-u.5
for
4332806
osa-u.5
for
4344256
osa-u.5
for
4338552
zma-u.5
for
100217203
zma-u.5
for
100284054
zma-u.5
for
100285019
tae-r.2
for
123061814
tae-r.2
for
123129630
tae-r.2
for
123097510
hvu-r.1
for
123448632
hvu-r.1
for
123444166
hvu-r.1
for
123424755
sbi-r.1
for
8079637
sbi-r.1
for
110430546
sbi-r.1
for
8082304
bdi-r.1
for
100834993
bdi-r.1
for
100842985
bdi-r.1
for
100840113
cre-r.1
for
CHLRE_01g026450v5


Ortholog ID: 845
Species nta nta nta sly sly sly sot sot sot ath ath ath gma gma gma bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107799110 LOC107784867 LOC107784603 LOC101257670 LOC101247256 LOC101257012 LOC102584103 LOC102592958 LOC102581715 SR34 SR34a SR30 LOC100789847 LOC100786491 LOC100800653 LOC103836748 LOC103873059 LOC103868210 LOC100249315 LOC100255499 LOC100853709 LOC18103658 LOC18096446 LOC7462688 LOC11412312 LOC11430819 LOC11430016 LOC107904549 LOC107893284 LOC107919887 LOC106347782 LOC106418716 LOC106399770 LOC102626504 LOC102615989 LOC102611169 LOC4332806 LOC4344256 LOC4338552 LOC100217203 LOC100284054 LOC100285019 LOC123129630 LOC123078916 LOC123070505 LOC123448632 LOC123444166 LOC123424755 LOC8079637 LOC110430546 LOC8082304 LOC100834993 LOC100842985 LOC100840113 CHLRE_01g026450v5
Function* serine/arginine-rich splicing factor SR34A serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR30 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR30 serine/arginine-rich-splicing factor SR34-like serine/arginine-rich-splicing factor SR34-like serine/arginine-rich splicing factor SR30 RNA-binding (RRM/RBD/RNP motifs) family protein SER/ARG-rich protein 34A SERINE-ARGININE PROTEIN 30 serine/arginine-rich-splicing factor SR34 pre-mRNA-splicing factor SF2-like serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR30 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR34A serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR30-like serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 uncharacterized LOC100217203 pre-mRNA-splicing factor SF2 uncharacterized LOC100285019 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A-like serine/arginine-rich-splicing factor SR34-like serine/arginine-rich-splicing factor SR34-like serine/arginine-rich splicing factor SR30 serine/arginine-rich-splicing factor SR34-like serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR30 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 11
sly03015 mRNA surveillance pathway 7
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 10
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 11
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 9
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
vvi03010 Ribosome 4
vvi00510 N-Glycan biosynthesis 3
vvi00513 Various types of N-glycan biosynthesis 3
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03040 Spliceosome 5
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 7
mtr04120 Ubiquitin mediated proteolysis 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00514 Other types of O-glycan biosynthesis 2
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00514 Other types of O-glycan biosynthesis 2
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 11
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 10
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 9
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04141 Protein processing in endoplasmic reticulum 2
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
osa03040 Spliceosome 3
osa04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 7
zma03040 Spliceosome 7
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107799110 107784867 107784603 101257670 101247256 101257012 102584103 102592958 102581715 839262 824105 837433 100789847 100786491 100800653 103836748 103873059 103868210 100249315 100255499 100853709 18103658 18096446 7462688 11412312 11430819 11430016 107904549 107893284 107919887 106347782 106418716 106399770 102626504 102615989 102611169 4332806 4344256 4338552 100217203 100284054 100285019 123129630 123078916 123070505 123448632 123444166 123424755 8079637 110430546 8082304 100834993 100842985 100840113 5715295
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