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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107809295   putative pentatricopeptide repeat-containing protein At3g08820 
 sly-u.5   101266956   putative pentatricopeptide repeat-containing protein At3g08820 
 vvi-u.5   100250734   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 

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Top 50 coexpressed genes to 107809295 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107809295 (nta-r.1 coexpression data)

CoexMap"107809295"


ntaLOC107809295 | Entrez gene ID : 107809295      
Species nta sly vvi hvu zma ghi mtr ath gma bna sbi cit bra osa ppo bdi tae cre sot
Paralog 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (9561 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075107979.1 [sequence] [blastp]
XP_075107980.1 [sequence] [blastp]
XP_075107981.1 [sequence] [blastp]
XP_075107982.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_075107979.1)
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_075107980.1)
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_075107981.1)
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_075107982.1)
Subcellular
localization
TargetP
chlo 2  (predict for XP_075107979.1)
chlo 2  (predict for XP_075107980.1)
chlo 2  (predict for XP_075107981.1)
chlo 2  (predict for XP_075107982.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107809295
sly-u.5
for
101266956
vvi-u.5
for
100250734


Ortholog ID: 20071
Species nta nta sly sot vvi
Symbol LOC107809295 LOC107817850 LOC101266956 LOC102578778 LOC100250734
Function* putative pentatricopeptide repeat-containing protein At3g08820 zinc finger CCCH domain-containing protein 12-like putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 pentatricopeptide repeat-containing protein At1g08070, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04070 Phosphatidylinositol signaling system 4
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107809295 107817850 101266956 102578778 100250734
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