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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107817850   zinc finger CCCH domain-containing protein 12-like 
 sly-u.5   101266956   putative pentatricopeptide repeat-containing protein At3g08820 
 vvi-u.5   100250734   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 

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Top 50 coexpressed genes to 107817850 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107817850 (nta-r.1 coexpression data)

CoexMap"107817850"


ntaLOC107817850 | Entrez gene ID : 107817850      
Species nta sly vvi hvu zma ghi mtr ath gma bna sbi cit bra osa ppo bdi tae cre sot
Paralog 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4462 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016499226.1 [sequence] [blastp]
XP_016499227.1 [sequence] [blastp]
XP_016499229.1 [sequence] [blastp]
XP_075111755.1 [sequence] [blastp]
XP_075111756.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_016499226.1)
chlo 9,  mito 1  (predict for XP_016499227.1)
chlo 9,  mito 1  (predict for XP_016499229.1)
chlo 9,  mito 1  (predict for XP_075111755.1)
nucl 10  (predict for XP_075111756.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_016499226.1)
chlo 4  (predict for XP_016499227.1)
chlo 4  (predict for XP_016499229.1)
chlo 4  (predict for XP_075111755.1)
other 8,  chlo 3  (predict for XP_075111756.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107817850
sly-u.5
for
101266956
vvi-u.5
for
100250734


Ortholog ID: 20071
Species nta nta sly sot vvi
Symbol LOC107809295 LOC107817850 LOC101266956 LOC102578778 LOC100250734
Function* putative pentatricopeptide repeat-containing protein At3g08820 zinc finger CCCH domain-containing protein 12-like putative pentatricopeptide repeat-containing protein At3g08820 putative pentatricopeptide repeat-containing protein At3g08820 pentatricopeptide repeat-containing protein At1g08070, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04070 Phosphatidylinositol signaling system 4
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107809295 107817850 101266956 102578778 100250734
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