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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107809361   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 nta-r.1   107802326   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like 
 sly-u.5   101246924   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 sot-r.1   102584107   DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic 
 ath-u.5   EMB25   DEAD/DEAH box helicase 
 gma-u.5   100780908   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 bra-r.6   103831550   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 vvi-u.5   100253458   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 ppo-u.5   7492412   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 mtr-u.5   11413717   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 ghi-r.1   107903689   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 ghi-r.1   107886318   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 bna-r.1   106429555   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 bna-r.1   106347226   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like 
 cit-r.1   102612885   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 osa-u.5   4330670   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 zma-u.5   103627701   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 tae-r.2   123138288   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 tae-r.2   123128420   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 tae-r.2   123145542   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 hvu-r.1   123400978   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 sbi-r.1   8075739   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 bdi-r.1   100842242   DExH-box ATP-dependent RNA helicase DExH15 chloroplastic 
 cre-r.1   CHLRE_01g027150v5   uncharacterized protein 

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Top 50 coexpressed genes to 107809361 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107809361 (nta-r.1 coexpression data)

CoexMap"107809361"


ntaLOC107809361 | Entrez gene ID : 107809361      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 1 1 1 1 2 2 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070478 [list] [network] nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay  (4 genes)  IEA  
GO CC
GO:0055087 [list] [network] Ski complex  (5 genes)  IEA  
GO MF
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9393 genes)  IEA  
Protein XP_016489453.1 [sequence] [blastp]
XP_075096826.1 [sequence] [blastp]
XP_075096827.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_016489453.1)
chlo 9  (predict for XP_075096826.1)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_075096827.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016489453.1)
chlo 8  (predict for XP_075096826.1)
chlo 8  (predict for XP_075096827.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107809361
nta-r.1
for
107802326
sly-u.5
for
101246924
sot-r.1
for
102584107
ath-u.5
for
EMB25
gma-u.5
for
100780908
bra-r.6
for
103831550
vvi-u.5
for
100253458
ppo-u.5
for
7492412
mtr-u.5
for
11413717
ghi-r.1
for
107903689
ghi-r.1
for
107886318
bna-r.1
for
106429555
bna-r.1
for
106347226
cit-r.1
for
102612885
osa-u.5
for
4330670
zma-u.5
for
103627701
tae-r.2
for
123138288
tae-r.2
for
123128420
tae-r.2
for
123145542
hvu-r.1
for
123400978
sbi-r.1
for
8075739
bdi-r.1
for
100842242
cre-r.1
for
CHLRE_01g027150v5


Ortholog ID: 11114
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107809361 LOC107802326 LOC101246924 LOC102584107 EMB25 LOC100780908 LOC103831550 LOC100253458 LOC7492412 LOC11413717 LOC107903689 LOC107886318 LOC106429555 LOC106347226 LOC102612885 LOC4330670 LOC103627701 LOC123138288 LOC123128420 LOC123145542 LOC123400978 LOC8075739 LOC100842242 CHLRE_01g027150v5
Function* DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic DEAD/DEAH box helicase DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic DExH-box ATP-dependent RNA helicase DExH15 chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi00051 Fructose and mannose metabolism 2
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107809361 107802326 101246924 102584107 843343 100780908 103831550 100253458 7492412 11413717 107903689 107886318 106429555 106347226 102612885 4330670 103627701 123138288 123128420 123145542 123400978 8075739 100842242 5715305
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